RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 C19orf60Q96EN9 201 aa18.16■□□□□ 0.5
UPF1-209ENST00000600310 FCRL1Q96LA6 429 aa18.16■□□□□ 0.5
UPF1-209ENST00000600310 PPP3R2Q96LZ3 170 aa18.16■□□□□ 0.5
UPF1-209ENST00000600310 WDR41Q9HAD4 459 aa18.16■□□□□ 0.5
UPF1-209ENST00000600310 RIC8BQ9NVN3 520 aa18.16■□□□□ 0.5
UPF1-209ENST00000600310 TEX10Q9NXF1 929 aaPredicted RBP18.16■□□□□ 0.5
UPF1-209ENST00000600310 FBXL4Q9UKA2 621 aa18.16■□□□□ 0.5
UPF1-209ENST00000600310 KCNMB2Q9Y691 235 aa18.16■□□□□ 0.5
UPF1-209ENST00000600310 ANKRD11Q6UB99 2663 aaPredicted RBP18.16■□□□□ 0.5
UPF1-209ENST00000600310 NBEAQ8NFP9 2946 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 IGHV1-45A0A0A0MS14 117 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 GNG14A0A1W2PPG7 69 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 TCRBV16S1A1N1A0A5B0 115 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 SYNDIG1LA6NDD5 238 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 ARGFXA6NJG6 315 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 HPP00738 406 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 JUNP05412 331 aaKnown RBP18.15■□□□□ 0.5
UPF1-209ENST00000600310 ANXA4P09525 319 aaPredicted RBP18.15■□□□□ 0.5
UPF1-209ENST00000600310 COX6A1P12074 109 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 RRADP55042 308 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 EEF1A2Q05639 463 aaKnown RBP18.15■□□□□ 0.5
UPF1-209ENST00000600310 TBR1Q16650 682 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 RFTN2Q52LD8 501 aaPredicted RBP18.15■□□□□ 0.5
UPF1-209ENST00000600310 DCAF10Q5QP82 559 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 NDUFAF5Q5TEU4 345 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 NOXRED1Q6NXP6 359 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 BORAQ6PGQ7 559 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 NDUFAF7Q7L592 441 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 APLFQ8IW19 511 aaPredicted RBP18.15■□□□□ 0.5
UPF1-209ENST00000600310 C7orf57Q8NEG2 295 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 APOBEC4Q8WW27 367 aaKnown RBP18.15■□□□□ 0.5
UPF1-209ENST00000600310 ANKRD9Q96BM1 317 aaPredicted RBP18.15■□□□□ 0.5
UPF1-209ENST00000600310 MAGEB18Q96M61 343 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 C7orf26Q96N11 449 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 EBPLQ9BY08 206 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 ZNF700Q9H0M5 742 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 LHX6Q9UPM6 363 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 TMED5Q9Y3A6 229 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 POLR3HQ9Y535 204 aaPredicted RBP18.15■□□□□ 0.5
UPF1-209ENST00000600310 PCDHA9Q9Y5H5 950 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 CELSR3Q9NYQ7 3312 aa18.15■□□□□ 0.5
UPF1-209ENST00000600310 ATRXP46100 2492 aa18.14■□□□□ 0.5
UPF1-209ENST00000600310 PCSK5Q92824 1860 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 ATP6AP2A0A1C7CYW4 349 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 SLCO1B7G3V0H7 640 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 TGFBR3LH3BV60 316 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 PRKRAO75569 313 aaKnown RBP18.14■□□□□ 0.49
UPF1-209ENST00000600310 ATP6AP2O75787 350 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 PPP2R1BP30154 601 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 OR4D2P58180 307 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 RHDQ02161 417 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 SERTAD2Q14140 314 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 PCOLCEQ15113 449 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 OR52E8Q6IFG1 317 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 RGS9BPQ6ZS82 235 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 CLNKQ7Z7G1 428 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 CRLF3Q8IUI8 442 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 C16orf78Q8WTQ4 265 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 UCN3Q969E3 161 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 TUBGCP3Q96CW5 907 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 WDR77Q9BQA1 342 aaPredicted RBP18.14■□□□□ 0.49
UPF1-209ENST00000600310 FAIM2Q9BWQ8 316 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 ING2Q9H160 280 aa18.14■□□□□ 0.49
UPF1-209ENST00000600310 WBP11Q9Y2W2 641 aaKnown RBP18.14■□□□□ 0.49
UPF1-209ENST00000600310 NSG1A0A0A6YYJ2 146 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 IGHV3-20A0A0C4DH32 117 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 C1orf226A1L170 272 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 GLOD5A6NK44 160 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 WASHC1A8K0Z3 465 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 PGRMC2O15173 223 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 HDAC3O15379 428 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 FGF17O60258 216 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 LDB3O75112 727 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 PEX11AO75192 247 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 HK2P52789 917 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 TAS2R50P59544 299 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 RPL38P63173 70 aaKnown RBP18.13■□□□□ 0.49
UPF1-209ENST00000600310 IGLV3-21P80748 117 aaPredicted RBP18.13■□□□□ 0.49
UPF1-209ENST00000600310 ZNF763Q0D2J5 394 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 STX4Q12846 297 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 GALNTL6Q49A17 601 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 ATP6AP1LQ52LC2 224 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 SFT2D3Q587I9 215 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 C6orf136Q5SQH8 315 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 CPZQ66K79 652 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 DNAJB14Q8TBM8 379 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 PIWIL2Q8TC59 973 aaKnown RBP18.13■□□□□ 0.49
UPF1-209ENST00000600310 TTC9Q92623 222 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 EXTL1Q92935 676 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 IMMP1LQ96LU5 166 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 ALOXE3Q9BYJ1 711 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 NUF2Q9BZD4 464 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 MEAF6Q9HAF1 191 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 SLCO1B3Q9NPD5 702 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 VTI1BQ9UEU0 232 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 MARCOQ9UEW3 520 aaPredicted RBP18.13■□□□□ 0.49
UPF1-209ENST00000600310 DLGAP4Q9Y2H0 992 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 NUP210LQ5VU65 1888 aa18.13■□□□□ 0.49
UPF1-209ENST00000600310 GPR75O95800 540 aa18.12■□□□□ 0.49
UPF1-209ENST00000600310 IL3P08700 152 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms