RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 ANKRD9Q96BM1 317 aaPredicted RBP14.69□□□□□ -0.06
VRK3-221ENST00000600284 MRRFQ96E11 262 aaKnown RBP14.69□□□□□ -0.06
VRK3-221ENST00000600284 GPR78Q96P69 363 aa14.69□□□□□ -0.06
VRK3-221ENST00000600284 OR51B5Q9H339 312 aa14.69□□□□□ -0.06
VRK3-221ENST00000600284 ACTR8Q9H981 624 aa14.69□□□□□ -0.06
VRK3-221ENST00000600284 RYDENQ9NUL5 291 aaKnown RBP14.69□□□□□ -0.06
VRK3-221ENST00000600284 HPF1Q9NWY4 346 aa14.69□□□□□ -0.06
VRK3-221ENST00000600284 NINJ2Q9NZG7 142 aa14.69□□□□□ -0.06
VRK3-221ENST00000600284 TINAGQ9UJW2 476 aa14.69□□□□□ -0.06
VRK3-221ENST00000600284 ERVK-11Q9UQG0 969 aa14.69□□□□□ -0.06
VRK3-221ENST00000600284 MEMO1Q9Y316 297 aa14.69□□□□□ -0.06
VRK3-221ENST00000600284 CELSR2Q9HCU4 2923 aa14.69□□□□□ -0.06
VRK3-221ENST00000600284 C17orf105B2RV13 164 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 PRRG2O14669 202 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 TFECO14948 347 aaPredicted RBP14.68□□□□□ -0.06
VRK3-221ENST00000600284 OR2J2O76002 312 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 TUBB4AP04350 444 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 RBP1P09455 135 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 COX7A2P14406 83 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 TLX1P31314 330 aaPredicted RBP14.68□□□□□ -0.06
VRK3-221ENST00000600284 ADORA2A-AS1P86434 159 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 SLAMF1Q13291 335 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 CUL3Q13618 768 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 GTF2H2Q13888 395 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 UAP1Q16222 522 aaPredicted RBP14.68□□□□□ -0.06
VRK3-221ENST00000600284 ZNF630Q2M218 657 aaPredicted RBP14.68□□□□□ -0.06
VRK3-221ENST00000600284 GTF2H2CQ6P1K8 395 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 GPR180Q86V85 440 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 CHERPQ8IWX8 916 aaKnown RBP14.68□□□□□ -0.06
VRK3-221ENST00000600284 L3MBTL4Q8NA19 623 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 SLC2A12Q8TD20 617 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 PHF10Q8WUB8 498 aaKnown RBP14.68□□□□□ -0.06
VRK3-221ENST00000600284 SLC44A1Q8WWI5 657 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 ASB15Q8WXK1 588 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 ISL2Q96A47 359 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 MARVELD3Q96A59 401 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 C16orf45Q96MC5 204 aaPredicted RBP14.68□□□□□ -0.06
VRK3-221ENST00000600284 RASL10BQ96S79 203 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 OR8D2Q9GZM6 311 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 RPF2Q9H7B2 306 aaKnown RBP14.68□□□□□ -0.06
VRK3-221ENST00000600284 DMRT3Q9NQL9 472 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 COPS7AQ9UBW8 275 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 PHF11Q9UIL8 331 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 TMCO1Q9UM00 188 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 PPT2Q9UMR5 302 aa14.68□□□□□ -0.06
VRK3-221ENST00000600284 CRYBG3Q68DQ2 2970 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 ITPR2Q14571 2701 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 E9PLN8 166 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 FOXE1O00358 373 aaPredicted RBP14.67□□□□□ -0.06
VRK3-221ENST00000600284 SAP18O00422 153 aaKnown RBP14.67□□□□□ -0.06
VRK3-221ENST00000600284 PLPP1O14494 284 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 DYRK3O43781 588 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 SH3BGRLO75368 114 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 INHBAP08476 426 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 HTR1EP28566 365 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 MAGEA12P43365 314 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 STT3AP46977 705 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 SERPINB9P50453 376 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 HK2P52789 917 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 RNF4P78317 190 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 DDX39BQ13838 428 aaKnown RBP14.67□□□□□ -0.06
VRK3-221ENST00000600284 GLE1Q53GS7 698 aaKnown RBP14.67□□□□□ -0.06
VRK3-221ENST00000600284 DOLPP1Q86YN1 238 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 MYLK4Q86YV6 388 aaPredicted RBP14.67□□□□□ -0.06
VRK3-221ENST00000600284 LURAP1LQ8IV03 231 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 PSD4Q8NDX1 1056 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 MNS1Q8NEH6 495 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 ZNF721Q8TF20 911 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 RBM18Q96H35 190 aaKnown RBP14.67□□□□□ -0.06
VRK3-221ENST00000600284 ART5Q96L15 291 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 SGCZQ96LD1 299 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 MTERF1Q99551 399 aaKnown RBP14.67□□□□□ -0.06
VRK3-221ENST00000600284 VKORC1Q9BQB6 163 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 VPS11Q9H270 941 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 CDC42EP4Q9H3Q1 356 aaKnown RBP14.67□□□□□ -0.06
VRK3-221ENST00000600284 IPPKQ9H8X2 491 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 LYARQ9NX58 379 aaKnown RBP14.67□□□□□ -0.06
VRK3-221ENST00000600284 IKBKGQ9Y6K9 419 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 CENPEQ02224 2701 aa14.67□□□□□ -0.06
VRK3-221ENST00000600284 MYOCOSA0A1B0GUC4 107 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 ARHGAP10A1A4S6 786 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 WWP2O00308 870 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 PROM1O43490 865 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 FGF17O60258 216 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 KRT38O76015 456 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 OR6B1O95007 311 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 COL6A2P12110 1019 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 CNTFP26441 200 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 BUD31P41223 144 aaPredicted RBP14.66□□□□□ -0.06
VRK3-221ENST00000600284 RPS13P62277 151 aaKnown RBP14.66□□□□□ -0.06
VRK3-221ENST00000600284 HSF1Q00613 529 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 MPEG1Q2M385 716 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 CMPK2Q5EBM0 449 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 TECRLQ5HYJ1 363 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 C10orf62Q5T681 223 aaPredicted RBP14.66□□□□□ -0.06
VRK3-221ENST00000600284 MRM1Q6IN84 353 aaKnown RBP14.66□□□□□ -0.06
VRK3-221ENST00000600284 PAOXQ6QHF9 649 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 OPN5Q6U736 354 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 IL20RBQ6UXL0 311 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 C16orf47Q6ZP98 133 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms