RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 OR7G3Q8NG95 312 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 OR5L2Q8NGL0 311 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 OR8K3Q8NH51 312 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 SLC2A12Q8TD20 617 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 PTPMT1Q8WUK0 201 aaPredicted RBP9.1□□□□□ -0.95
VRK3-216ENST00000599342 SREK1Q8WXA9 508 aaKnown RBP9.1□□□□□ -0.95
VRK3-216ENST00000599342 DGAT2Q96PD7 388 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 RASL10BQ96S79 203 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 DMRTA2Q96SC8 542 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 ATOH8Q96SQ7 321 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 TP63Q9H3D4 680 aaPredicted RBP9.1□□□□□ -0.95
VRK3-216ENST00000599342 IGSF5Q9NSI5 407 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 MS4A12Q9NXJ0 267 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 ACOT9Q9Y305 439 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 CCDC189A1A4V9 331 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 TMEM200CA6NKL6 621 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 PDE9AO76083 593 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 SCELO95171 688 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 SSTR2P30874 369 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 TLX1P31314 330 aaPredicted RBP9.09□□□□□ -0.95
VRK3-216ENST00000599342 PHBP35232 272 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 BUD31P41223 144 aaPredicted RBP9.09□□□□□ -0.95
VRK3-216ENST00000599342 ETF1P62495 437 aaKnown RBP9.09□□□□□ -0.95
VRK3-216ENST00000599342 PPIAP62937 165 aaKnown RBP9.09□□□□□ -0.95
VRK3-216ENST00000599342 RNF4P78317 190 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 PLIN5Q00G26 463 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 ID2Q02363 134 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 CKAP4Q07065 602 aaKnown RBP9.09□□□□□ -0.95
VRK3-216ENST00000599342 DLG1Q12959 904 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 SLAMF1Q13291 335 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 CDSNQ15517 529 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 UAP1Q16222 522 aaPredicted RBP9.09□□□□□ -0.95
VRK3-216ENST00000599342 NDUFAF5Q5TEU4 345 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 MROH9Q5TGP6 573 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 TMEM211Q6ICI0 200 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 OR4C11Q6IEV9 310 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 OPN5Q6U736 354 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 ZDHHC24Q6UX98 284 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 RTL4Q6ZR62 310 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 RGS9BPQ6ZS82 235 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 ZNF321PQ8N8H1 164 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 GOLM1Q8NBJ4 401 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 OR52N2Q8NGI0 321 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 HUS1BQ8NHY5 278 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 RHEBL1Q8TAI7 183 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 KCTD4Q8WVF5 259 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 RGMAQ96B86 450 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 NXNL1Q96CM4 212 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 REPS1Q96D71 796 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 MRRFQ96E11 262 aaKnown RBP9.09□□□□□ -0.95
VRK3-216ENST00000599342 ART5Q96L15 291 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 FAM173AQ9BQD7 235 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 TTTY12Q9BZ98 90 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 TRIM8Q9BZR9 551 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 DEFB127Q9H1M4 99 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 OR51B5Q9H339 312 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 RPF2Q9H7B2 306 aaKnown RBP9.09□□□□□ -0.95
VRK3-216ENST00000599342 ACTR8Q9H981 624 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 DMRT3Q9NQL9 472 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 DEPPQ9NTK1 212 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 PHF11Q9UIL8 331 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 PCDHGA11Q9Y5H2 935 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 NOTCH2Q04721 2471 aa9.09□□□□□ -0.95
VRK3-216ENST00000599342 FAM166BA8MTA8 275 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 G3V3Y1 287 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 C19orf84I3L1E1 186 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 ADAM10O14672 748 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 FGF17O60258 216 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 UGDHO60701 494 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 ETHE1O95571 254 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 P04436 131 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 C2P06681 752 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 CNR1P21554 472 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 ARL1P40616 181 aaPredicted RBP9.08□□□□□ -0.96
VRK3-216ENST00000599342 PIK3CBP42338 1070 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 STT3AP46977 705 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 PIK3CGP48736 1102 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 SERPINB8P50452 374 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 ALDH18A1P54886 795 aaKnown RBP9.08□□□□□ -0.96
VRK3-216ENST00000599342 IRF9Q00978 393 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 TNFRSF17Q02223 184 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 FOLH1Q04609 750 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 PCDH1Q08174 1060 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 BIKQ13323 160 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 SETDB1Q15047 1291 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 ACAP2Q15057 778 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 PFKFB4Q16877 469 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 ZNF750Q32MQ0 723 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 DEPDC1Q5TB30 811 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 LIPJQ5W064 366 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 C8orf74Q6P047 294 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 CEP128Q6ZU80 1094 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 FAM47EQ6ZV65 393 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 GPR180Q86V85 440 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 OR4N5Q8IXE1 308 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 SLC22A8Q8TCC7 542 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 ZNF721Q8TF20 911 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 CHTF18Q8WVB6 975 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 ASB5Q8WWX0 329 aa9.08□□□□□ -0.96
VRK3-216ENST00000599342 RND1Q92730 232 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms