RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 TRGV8A0A0C4DH27 118 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 SYCE1LA8MT33 242 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 NPIPA5E9PKD4 350 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 POC1B-GALNT4F8VUJ3 575 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 HPDP32754 393 aaPredicted RBP12.82□□□□□ -0.36
SCAF1-203ENST00000598359 RFC3P40938 356 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 SSR2P43308 183 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 PIK3CGP48736 1102 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 CLCN2P51788 898 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 GPR143P51810 404 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 TGM3Q08188 693 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 ACAP2Q15057 778 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 RNFT1Q5M7Z0 435 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 KHDRBS2Q5VWX1 349 aaKnown RBP12.82□□□□□ -0.36
SCAF1-203ENST00000598359 GRHL2Q6ISB3 625 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 SLC25A25Q6KCM7 469 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 TDRPQ86YL5 185 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 OR4N5Q8IXE1 308 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 LGI4Q8N135 537 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 CPSF7Q8N684 471 aaKnown RBP12.82□□□□□ -0.36
SCAF1-203ENST00000598359 HUS1BQ8NHY5 278 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 SLC44A1Q8WWI5 657 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 FRMD6Q96NE9 622 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 PAFAH2Q99487 392 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 TBCDQ9BTW9 1192 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 ACTR8Q9H981 624 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 FETUBQ9UGM5 382 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 NPIPA1Q9UND3 350 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 PCDHGB6Q9Y5F9 930 aa12.82□□□□□ -0.36
SCAF1-203ENST00000598359 A0A087WUV0 522 aaPredicted RBP12.81□□□□□ -0.36
SCAF1-203ENST00000598359 RGS16O15492 202 aaPredicted RBP12.81□□□□□ -0.36
SCAF1-203ENST00000598359 CTNSO60931 367 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 PRKRAO75569 313 aaKnown RBP12.81□□□□□ -0.36
SCAF1-203ENST00000598359 ITGA10O75578 1167 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 INHBAP08476 426 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 HIST1H1TP22492 207 aaPredicted RBP12.81□□□□□ -0.36
SCAF1-203ENST00000598359 ELAVL4P26378 380 aaKnown RBP12.81□□□□□ -0.36
SCAF1-203ENST00000598359 DCTP40126 519 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 MDH1P40925 334 aaKnown RBP12.81□□□□□ -0.36
SCAF1-203ENST00000598359 CYB561P49447 251 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 HLCSP50747 726 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 ALDH18A1P54886 795 aaKnown RBP12.81□□□□□ -0.36
SCAF1-203ENST00000598359 RPS13P62277 151 aaKnown RBP12.81□□□□□ -0.36
SCAF1-203ENST00000598359 HSF1Q00613 529 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 ALDH6A1Q02252 535 aaKnown RBP12.81□□□□□ -0.36
SCAF1-203ENST00000598359 STX4Q12846 297 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 GTF2H2Q13888 395 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 CPSF6Q16630 551 aaKnown RBP eCLIP12.81□□□□□ -0.36
SCAF1-203ENST00000598359 AP5B1Q2VPB7 878 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 TECRLQ5HYJ1 363 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 FAM219BQ5XKK7 198 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 GTF2H2CQ6P1K8 395 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 KLC3Q6P597 504 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 CHSY3Q70JA7 882 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 ZNF771Q7L3S4 317 aaPredicted RBP12.81□□□□□ -0.36
SCAF1-203ENST00000598359 GOLGA7Q7Z5G4 137 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 HORMAD2Q8N7B1 307 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 PTGR2Q8N8N7 351 aaPredicted RBP12.81□□□□□ -0.36
SCAF1-203ENST00000598359 TMEM178AQ8NBL3 297 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 ADAMTS18Q8TE60 1221 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 EPS8L3Q8TE67 593 aaKnown RBP12.81□□□□□ -0.36
SCAF1-203ENST00000598359 DOK4Q8TEW6 326 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 PTPMT1Q8WUK0 201 aaPredicted RBP12.81□□□□□ -0.36
SCAF1-203ENST00000598359 UBE2E3Q969T4 207 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 PHF21BQ96EK2 531 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 CMTM7Q96FZ5 175 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 VMP1Q96GC9 406 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 CDK15Q96Q40 435 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 ALOXE3Q9BYJ1 711 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 LYRM4Q9HD34 91 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 ADAP2Q9NPF8 381 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 DMRT3Q9NQL9 472 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 RNF11Q9Y3C5 154 aa12.81□□□□□ -0.36
SCAF1-203ENST00000598359 A0A1B0GUH1 482 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 ASPDHA6ND91 283 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 TMEM200CA6NKL6 621 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 WASHC1A8K0Z3 465 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 PLPP1O14494 284 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 FCHO1O14526 889 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 KLK8O60259 260 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 NME2P1O60361 137 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 TNNI3P19429 210 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 NME2P22392 152 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 CPN2P22792 545 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 TRHRP34981 398 aaPredicted RBP12.8□□□□□ -0.36
SCAF1-203ENST00000598359 MAGEA12P43365 314 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 NEK2P51955 445 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 RAP1GDS1P52306 607 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 PER3P56645 1201 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 MAGOHP61326 146 aaKnown RBP12.8□□□□□ -0.36
SCAF1-203ENST00000598359 GNGT1P63211 74 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 PCDH1Q08174 1060 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 SLAMF1Q13291 335 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 ZRSR2Q15696 482 aaKnown RBP12.8□□□□□ -0.36
SCAF1-203ENST00000598359 ELAVL1Q15717 326 aaKnown RBP12.8□□□□□ -0.36
SCAF1-203ENST00000598359 TMEM35AQ53FP2 167 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 DEPDC1Q5TB30 811 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 C18orf63Q68DL7 685 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 OR4C11Q6IEV9 310 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 RPS27LQ71UM5 84 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms