RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 CA7P43166 264 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 RAP1GDS1P52306 607 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 BIKQ13323 160 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 RNFT1Q5M7Z0 435 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 HSDL2Q6YN16 418 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 TAOK1Q7L7X3 1001 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 GPR180Q86V85 440 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 SIAH3Q8IW03 269 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 SULF2Q8IWU5 870 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 ZCCHC7Q8N3Z6 543 aaKnown RBP14.02□□□□□ -0.17
LIG1-215ENST00000597901 CPSF7Q8N684 471 aaKnown RBP14.02□□□□□ -0.17
LIG1-215ENST00000597901 CEP112Q8N8E3 955 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 ZNF321PQ8N8H1 164 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 OR14A16Q8NHC5 309 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 WDR20Q8TBZ3 569 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 TANKQ92844 425 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 MTFMTQ96DP5 389 aaKnown RBP14.02□□□□□ -0.17
LIG1-215ENST00000597901 OR8D2Q9GZM6 311 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 RPF2Q9H7B2 306 aaKnown RBP14.02□□□□□ -0.17
LIG1-215ENST00000597901 MYOTQ9UBF9 498 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 TMCO1Q9UM00 188 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 ATG4BQ9Y4P1 393 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 HIVEP3Q5T1R4 2406 aa14.02□□□□□ -0.17
LIG1-215ENST00000597901 WASHC1A8K0Z3 465 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 KLRC4-KLRK1H3BQV0 150 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 STX16-NPEPL1H3BU86 382 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 FOXE1O00358 373 aaPredicted RBP14.01□□□□□ -0.17
LIG1-215ENST00000597901 STX16O14662 325 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 PROM1O43490 865 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 PEX1O43933 1283 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 FGF17O60258 216 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 SLC19A2O60779 497 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 SMIM24O75264 130 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 OR2J2O76002 312 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 ETHE1O95571 254 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 SNRPAP09012 282 aaKnown RBP14.01□□□□□ -0.17
LIG1-215ENST00000597901 TLX1P31314 330 aaPredicted RBP14.01□□□□□ -0.17
LIG1-215ENST00000597901 BSGP35613 385 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 SSR4P51571 173 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 PHEXP78562 749 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 IGLV3-21P80748 117 aaPredicted RBP14.01□□□□□ -0.17
LIG1-215ENST00000597901 CUL3Q13618 768 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 TSNAXIP1Q2TAA8 658 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 LGSNQ5TDP6 509 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 C18orf63Q68DL7 685 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 ZNF787Q6DD87 383 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 MDGA2Q7Z553 956 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 SPPL2CQ8IUH8 684 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 IFT20Q8IY31 132 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 CYP4Z2PQ8N1L4 340 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 TMEM151AQ8N4L1 468 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 SREK1Q8WXA9 508 aaKnown RBP14.01□□□□□ -0.17
LIG1-215ENST00000597901 PPWD1Q96BP3 646 aaKnown RBP14.01□□□□□ -0.17
LIG1-215ENST00000597901 RBM18Q96H35 190 aaKnown RBP14.01□□□□□ -0.17
LIG1-215ENST00000597901 CDK15Q96Q40 435 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 MRPL57Q9BQC6 102 aaKnown RBP14.01□□□□□ -0.17
LIG1-215ENST00000597901 NTMT1Q9BV86 223 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 ZNF717Q9BY31 904 aaPredicted RBP14.01□□□□□ -0.17
LIG1-215ENST00000597901 DDX31Q9H8H2 851 aaKnown RBP14.01□□□□□ -0.17
LIG1-215ENST00000597901 XPR1Q9UBH6 696 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 ZNF835Q9Y2P0 537 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 KLF13Q9Y2Y9 288 aaPredicted RBP14.01□□□□□ -0.17
LIG1-215ENST00000597901 ASB4Q9Y574 426 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 CPAMD8Q8IZJ3 1885 aa14.01□□□□□ -0.17
LIG1-215ENST00000597901 UTP20O75691 2785 aaKnown RBP14□□□□□ -0.17
LIG1-215ENST00000597901 WWP2O00308 870 aa14□□□□□ -0.17
LIG1-215ENST00000597901 EEDO75530 441 aaKnown RBP14□□□□□ -0.17
LIG1-215ENST00000597901 DCTP40126 519 aa14□□□□□ -0.17
LIG1-215ENST00000597901 STT3AP46977 705 aa14□□□□□ -0.17
LIG1-215ENST00000597901 MEOX1P50221 254 aa14□□□□□ -0.17
LIG1-215ENST00000597901 CCNG1P51959 295 aa14□□□□□ -0.17
LIG1-215ENST00000597901 CASP6P55212 293 aa14□□□□□ -0.17
LIG1-215ENST00000597901 HNRNPH2P55795 449 aaKnown RBP14□□□□□ -0.17
LIG1-215ENST00000597901 RNF4P78317 190 aa14□□□□□ -0.17
LIG1-215ENST00000597901 C3AR1Q16581 482 aa14□□□□□ -0.17
LIG1-215ENST00000597901 SP5Q6BEB4 398 aaPredicted RBP14□□□□□ -0.17
LIG1-215ENST00000597901 MRM1Q6IN84 353 aaKnown RBP14□□□□□ -0.17
LIG1-215ENST00000597901 IL20RBQ6UXL0 311 aa14□□□□□ -0.17
LIG1-215ENST00000597901 TIFABQ6ZNK6 161 aa14□□□□□ -0.17
LIG1-215ENST00000597901 TRMT10CQ7L0Y3 403 aaKnown RBP14□□□□□ -0.17
LIG1-215ENST00000597901 POGLUT1Q8NBL1 392 aa14□□□□□ -0.17
LIG1-215ENST00000597901 OR52B6Q8NGF0 335 aa14□□□□□ -0.17
LIG1-215ENST00000597901 OR5L2Q8NGL0 311 aa14□□□□□ -0.17
LIG1-215ENST00000597901 OR8K3Q8NH51 312 aa14□□□□□ -0.17
LIG1-215ENST00000597901 SLC2A12Q8TD20 617 aa14□□□□□ -0.17
LIG1-215ENST00000597901 ZNF721Q8TF20 911 aa14□□□□□ -0.17
LIG1-215ENST00000597901 SENP5Q96HI0 755 aaPredicted RBP14□□□□□ -0.17
LIG1-215ENST00000597901 ZBTB26Q9HCK0 441 aa14□□□□□ -0.17
LIG1-215ENST00000597901 PHF11Q9UIL8 331 aa14□□□□□ -0.17
LIG1-215ENST00000597901 SH3BGRL2Q9UJC5 107 aa14□□□□□ -0.17
LIG1-215ENST00000597901 PCTPQ9UKL6 214 aa14□□□□□ -0.17
LIG1-215ENST00000597901 ERVK-11Q9UQG0 969 aa14□□□□□ -0.17
LIG1-215ENST00000597901 EXOC1LA0A1B0GW35 172 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 A0A1W2PR48 441 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 ZNHIT1O43257 154 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 TMPRSS11DO60235 418 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 GPR75O95800 540 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 ABHD2P08910 425 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 SBK3P0C264 359 aa13.99□□□□□ -0.17
LIG1-215ENST00000597901 FAM58BPP0C7Q3 252 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms