RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 VTI1BQ9UEU0 232 aa15.64■□□□□ 0.09
SSBP4-204ENST00000597724 PPIEQ9UNP9 301 aaKnown RBP15.64■□□□□ 0.09
SSBP4-204ENST00000597724 PLLPQ9Y342 182 aa15.64■□□□□ 0.09
SSBP4-204ENST00000597724 RP1L1Q8IWN7 2480 aaPredicted RBP15.63■□□□□ 0.09
SSBP4-204ENST00000597724 MYOCOSA0A1B0GUC4 107 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 MANBAO00462 879 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 UBFD1O14562 309 aaKnown RBP15.63■□□□□ 0.09
SSBP4-204ENST00000597724 ESRRBO95718 433 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 WDPCPO95876 746 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 KRT6AP02538 564 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 KRT6BP04259 564 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 TLX1P31314 330 aaPredicted RBP15.63■□□□□ 0.09
SSBP4-204ENST00000597724 BUD31P41223 144 aaPredicted RBP15.63■□□□□ 0.09
SSBP4-204ENST00000597724 KRT6CP48668 564 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 GPR143P51810 404 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 TAS2R50P59544 299 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 TNFRSF17Q02223 184 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 STX4Q12846 297 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 SERTAD2Q14140 314 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 ZNF169Q14929 603 aaPredicted RBP15.63■□□□□ 0.09
SSBP4-204ENST00000597724 ELAVL1Q15717 326 aaKnown RBP15.63■□□□□ 0.09
SSBP4-204ENST00000597724 PRR30Q53SZ7 412 aaPredicted RBP15.63■□□□□ 0.09
SSBP4-204ENST00000597724 TCHHL1Q5QJ38 904 aaPredicted RBP15.63■□□□□ 0.09
SSBP4-204ENST00000597724 C18orf63Q68DL7 685 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 FCRLBQ6BAA4 426 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 FRMD7Q6ZUT3 714 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 CRLF3Q8IUI8 442 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 METTL4Q8N3J2 472 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 TANKQ92844 425 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 ADAM29Q9UKF5 820 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 SLC12A4Q9UP95 1085 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 PCDHGA10Q9Y5H3 936 aa15.63■□□□□ 0.09
SSBP4-204ENST00000597724 A0A1W2PR48 441 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 FGF17O60258 216 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 ULK1O75385 1050 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 IFNA16P05015 189 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 ENO1P06733 434 aaKnown RBP15.62■□□□□ 0.09
SSBP4-204ENST00000597724 HSD3B1P14060 373 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 HSD3B2P26439 372 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 TPP2P29144 1249 aaPredicted RBP15.62■□□□□ 0.09
SSBP4-204ENST00000597724 HMOX2P30519 316 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 TNFSF10P50591 281 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 IGLV3-21P80748 117 aaPredicted RBP15.62■□□□□ 0.09
SSBP4-204ENST00000597724 PCLAFQ15004 111 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 MEP1AQ16819 746 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 PAGE2Q7Z2X7 111 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 TMEM132CQ8N3T6 1108 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 CISD2Q8N5K1 135 aaKnown RBP15.62■□□□□ 0.09
SSBP4-204ENST00000597724 SLC5A8Q8N695 610 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 C7orf57Q8NEG2 295 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 OR1N1Q8NGS0 311 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 AGAP11Q8TF27 550 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 PTPMT1Q8WUK0 201 aaPredicted RBP15.62■□□□□ 0.09
SSBP4-204ENST00000597724 SNRNP40Q96DI7 357 aaKnown RBP15.62■□□□□ 0.09
SSBP4-204ENST00000597724 HBEGFQ99075 208 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 IQCGQ9H095 443 aaKnown RBP15.62■□□□□ 0.09
SSBP4-204ENST00000597724 NMRK1Q9NWW6 199 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 VPS29Q9UBQ0 182 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 MID2Q9UJV3 735 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 CLCA3PQ9Y6N3 262 aa15.62■□□□□ 0.09
SSBP4-204ENST00000597724 SHANK1Q9Y566 2161 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 OR5H15A6NDH6 313 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 MAN1A2O60476 641 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 PRKRAO75569 313 aaKnown RBP15.61■□□□□ 0.09
SSBP4-204ENST00000597724 F10P00742 488 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 KLK1P06870 262 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 HTR6P50406 440 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 ID2Q02363 134 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 ZNF844Q08AG5 666 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 GALNT1Q10472 559 aaPredicted RBP15.61■□□□□ 0.09
SSBP4-204ENST00000597724 TBL3Q12788 808 aaKnown RBP15.61■□□□□ 0.09
SSBP4-204ENST00000597724 CSTF3Q12996 717 aaKnown RBP15.61■□□□□ 0.09
SSBP4-204ENST00000597724 BIKQ13323 160 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 KRT71Q3SY84 523 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 CFAP157Q5JU67 520 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 LIPMQ5VYY2 423 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 COMMD6Q7Z4G1 85 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 RPS19BP1Q86WX3 136 aaKnown RBP15.61■□□□□ 0.09
SSBP4-204ENST00000597724 C10orf107Q8IVU9 208 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 OR4N5Q8IXE1 308 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 LGI4Q8N135 537 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 BEST3Q8N1M1 668 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 ARMC10Q8N2F6 343 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 MORN4Q8NDC4 146 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 C19orf60Q96EN9 201 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 KCNA7Q96RP8 456 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 DEFB126Q9BYW3 111 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 CDCP1Q9H5V8 836 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 MID1IP1Q9NPA3 183 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 ZNF223Q9UK11 482 aaPredicted RBP15.61■□□□□ 0.09
SSBP4-204ENST00000597724 TIMM22Q9Y584 194 aa15.61■□□□□ 0.09
SSBP4-204ENST00000597724 COPG1Q9Y678 874 aaKnown RBP15.61■□□□□ 0.09
SSBP4-204ENST00000597724 TRAV17A0A0B4J275 112 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 SERTM1A2A2V5 107 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 CCDC151A5D8V7 595 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 WASHC1A8K0Z3 465 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 H3BQF6 201 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 SPAG7O75391 227 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 AIFM1O95831 613 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 NR2F6P10588 404 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms