RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 SORBS1Q9BX66 1292 aaKnown RBP12.17□□□□□ -0.46
USE1-207ENST00000596136 ERVK-6Q9BXR3 956 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 PPCSQ9HAB8 311 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 OLAHQ9NV23 265 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 PHF11Q9UIL8 331 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 ZNF225Q9UK10 706 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 FBXW2Q9UKT8 454 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 ATG4BQ9Y4P1 393 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 UTP20O75691 2785 aaKnown RBP12.17□□□□□ -0.46
USE1-207ENST00000596136 ASPDHA6ND91 283 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 TMEM200CA6NKL6 621 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 PPP6CO00743 305 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 DLX3O60479 287 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 LDB3O75112 727 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 EEDO75530 441 aaKnown RBP12.16□□□□□ -0.46
USE1-207ENST00000596136 DDAH2O95865 285 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 OTCP00480 354 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 CRYABP02511 175 aaKnown RBP12.16□□□□□ -0.46
USE1-207ENST00000596136 TAC1P20366 129 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 IMPDH1P20839 514 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 ATP5F1P24539 256 aaPredicted RBP12.16□□□□□ -0.46
USE1-207ENST00000596136 HLCSP50747 726 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 HNRNPH2P55795 449 aaKnown RBP12.16□□□□□ -0.46
USE1-207ENST00000596136 TNFRSF17Q02223 184 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 STX4Q12846 297 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 UNC50Q53HI1 259 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 ZNF678Q5SXM1 525 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 TEX35Q5T0J7 233 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 SPINK14Q6IE38 97 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 RPS27LQ71UM5 84 aaKnown RBP12.16□□□□□ -0.46
USE1-207ENST00000596136 HORMAD2Q8N7B1 307 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 OR8K3Q8NH51 312 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 OR14A16Q8NHC5 309 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 PRR7Q8TB68 274 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 RPF2Q9H7B2 306 aaKnown RBP12.16□□□□□ -0.46
USE1-207ENST00000596136 ANKZF1Q9H8Y5 726 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 SEMA4BQ9NPR2 832 aaPredicted RBP12.16□□□□□ -0.46
USE1-207ENST00000596136 LYARQ9NX58 379 aaKnown RBP12.16□□□□□ -0.46
USE1-207ENST00000596136 LRFN1Q9P244 771 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 TRPS1Q9UHF7 1281 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 DCDC2Q9UHG0 476 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 ADAM29Q9UKF5 820 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 CLCA3PQ9Y6N3 262 aa12.16□□□□□ -0.46
USE1-207ENST00000596136 DIDO1Q9BTC0 2240 aaKnown RBP12.16□□□□□ -0.46
USE1-207ENST00000596136 TRBV11-1A0A0K0K1C0 115 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 A0A1W2PPM1 405 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 FCHO1O14526 889 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 TMPRSS11DO60235 418 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 FGF17O60258 216 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 PRKNO60260 465 aaPredicted RBP12.15□□□□□ -0.46
USE1-207ENST00000596136 ZFAND5O76080 213 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 AGFG2O95081 481 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 SHBGP04278 402 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 IFNA16P05015 189 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 SP1P08047 785 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 FAM58BPP0C7Q3 252 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 PYGBP11216 843 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 CD46P15529 392 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 TLX1P31314 330 aaPredicted RBP12.15□□□□□ -0.46
USE1-207ENST00000596136 STT3AP46977 705 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 CYB561P49447 251 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 PRKAA2P54646 552 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 CDH13P55290 713 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 CLCQ05315 142 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 ELOAQ14241 798 aaKnown RBP12.15□□□□□ -0.46
USE1-207ENST00000596136 C18orf63Q68DL7 685 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 SLC25A25Q6KCM7 469 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 LETMD1Q6P1Q0 360 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 NUDT13Q86X67 352 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 SLC22A9Q8IVM8 553 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 METTL4Q8N3J2 472 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 TMEM178AQ8NBL3 297 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 SSC4DQ8WTU2 575 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 L3HYPDHQ96EM0 354 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 BRF2Q9HAW0 419 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 ANKRD10Q9NXR5 420 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 TBK1Q9UHD2 729 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 EMCNQ9ULC0 261 aa12.15□□□□□ -0.46
USE1-207ENST00000596136 A0A1W2PR48 441 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 GOLGA8RI6L899 631 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 NME2P1O60361 137 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 GPR75O95800 540 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 STSP08842 583 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 NME2P22392 152 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 MST1P26927 711 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 GALNSP34059 522 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 BUD31P41223 144 aaPredicted RBP12.14□□□□□ -0.47
USE1-207ENST00000596136 ST13P50502 369 aaKnown RBP12.14□□□□□ -0.47
USE1-207ENST00000596136 OC90Q02509 493 aaPredicted RBP12.14□□□□□ -0.47
USE1-207ENST00000596136 IFT88Q13099 833 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 TRPC4APQ8TEL6 797 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 ZNF721Q8TF20 911 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 MTFMTQ96DP5 389 aaKnown RBP12.14□□□□□ -0.47
USE1-207ENST00000596136 C5orf34Q96MH7 638 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 TMEM237Q96Q45 408 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 ZNF382Q96SR6 550 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 HES7Q9BYE0 225 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 AHSPQ9NZD4 102 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 MYOTQ9UBF9 498 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 ERRFI1Q9UJM3 462 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms