RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 PRTFDC1Q9NRG1 225 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 SIRT5Q9NXA8 310 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 MMACHCQ9Y4U1 282 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 LOC102723996A0A087X1L8 192 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 A0A1W2PR48 441 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 NPIPB8E9PQR5 432 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 SNX3O60493 162 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 ACPPP15309 386 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 MAOAP21397 527 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 MAPK12P53778 367 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 CORO7P57737 925 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 TNFRSF17Q02223 184 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 SLC13A2Q13183 592 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 LANCL3Q6ZV70 420 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 KIRREL3Q8IZU9 778 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 PNPOQ9NVS9 261 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 MCM8Q9UJA3 840 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 KCNMB2Q9Y691 235 aa18.15■□□□□ 0.5
PNKP-207ENST00000596014 PIEZO2Q9H5I5 2752 aa18.14■□□□□ 0.5
PNKP-207ENST00000596014 CROCCQ5TZA2 2017 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 IGKV3D-11A0A0A0MRZ8 115 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 BLACEA4D250 179 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 ARGFXA6NJG6 315 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 PCDH7O60245 1069 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 CTNSO60931 367 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 SKAP2O75563 359 aaPredicted RBP18.14■□□□□ 0.49
PNKP-207ENST00000596014 ITGB2P05107 769 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 TLX1P31314 330 aaPredicted RBP18.14■□□□□ 0.49
PNKP-207ENST00000596014 TIA1P31483 386 aaKnown RBP eCLIP18.14■□□□□ 0.49
PNKP-207ENST00000596014 BUD31P41223 144 aaPredicted RBP18.14■□□□□ 0.49
PNKP-207ENST00000596014 OCRLQ01968 901 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 KIAA0040Q15053 153 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 TBR1Q16650 682 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 CGB2Q6NT52 195 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 ANKRD37Q7Z713 158 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 SCUBE1Q8IWY4 988 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 METTL2AQ96IZ6 378 aaKnown RBP18.14■□□□□ 0.49
PNKP-207ENST00000596014 VPS50Q96JG6 964 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 CCT7Q99832 543 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 RPF2Q9H7B2 306 aaKnown RBP18.14■□□□□ 0.49
PNKP-207ENST00000596014 NECTIN3Q9NQS3 549 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 C1orf109Q9NX04 203 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 TEX10Q9NXF1 929 aaPredicted RBP18.14■□□□□ 0.49
PNKP-207ENST00000596014 FBXL4Q9UKA2 621 aa18.14■□□□□ 0.49
PNKP-207ENST00000596014 A0A1W2PQ72 361 aa18.13■□□□□ 0.49
PNKP-207ENST00000596014 SEC22BO75396 215 aa18.13■□□□□ 0.49
PNKP-207ENST00000596014 EEF1A2Q05639 463 aaKnown RBP18.13■□□□□ 0.49
PNKP-207ENST00000596014 NR6A1Q15406 480 aa18.13■□□□□ 0.49
PNKP-207ENST00000596014 XKR7Q5GH72 579 aa18.13■□□□□ 0.49
PNKP-207ENST00000596014 BORAQ6PGQ7 559 aa18.13■□□□□ 0.49
PNKP-207ENST00000596014 SPATA21Q7Z572 469 aa18.13■□□□□ 0.49
PNKP-207ENST00000596014 CPEB2Q7Z5Q1 589 aaKnown RBP18.13■□□□□ 0.49
PNKP-207ENST00000596014 TMEM102Q8N9M5 508 aaPredicted RBP18.13■□□□□ 0.49
PNKP-207ENST00000596014 LRRC8CQ8TDW0 803 aa18.13■□□□□ 0.49
PNKP-207ENST00000596014 EXTL1Q92935 676 aa18.13■□□□□ 0.49
PNKP-207ENST00000596014 TM4SF18Q96CE8 201 aa18.13■□□□□ 0.49
PNKP-207ENST00000596014 C3orf30Q96M34 536 aa18.13■□□□□ 0.49
PNKP-207ENST00000596014 FER1L6-AS2Q96M78 137 aa18.13■□□□□ 0.49
PNKP-207ENST00000596014 LRTM1Q9HBL6 345 aa18.13■□□□□ 0.49
PNKP-207ENST00000596014 C19orf25Q9UFG5 118 aaPredicted RBP18.13■□□□□ 0.49
PNKP-207ENST00000596014 CLDN16Q9Y5I7 305 aa18.13■□□□□ 0.49
PNKP-207ENST00000596014 DOCK10Q96BY6 2186 aa18.13■□□□□ 0.49
PNKP-207ENST00000596014 GNG14A0A1W2PPG7 69 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 TCRBV16S1A1N1A0A5B0 115 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 TGFBR3LH3BV60 316 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 LSM1O15116 133 aaKnown RBP18.12■□□□□ 0.49
PNKP-207ENST00000596014 GUCY1B2O75343 617 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 PRKRAO75569 313 aaKnown RBP18.12■□□□□ 0.49
PNKP-207ENST00000596014 AIFM1O95831 613 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 JUNP05412 331 aaKnown RBP18.12■□□□□ 0.49
PNKP-207ENST00000596014 NR2F6P10588 404 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 COX6A1P12074 109 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 DCAF10Q5QP82 559 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 FAM47EQ6ZV65 393 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 NDUFAF7Q7L592 441 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 APLFQ8IW19 511 aaPredicted RBP18.12■□□□□ 0.49
PNKP-207ENST00000596014 APOBEC4Q8WW27 367 aaKnown RBP18.12■□□□□ 0.49
PNKP-207ENST00000596014 C19orf60Q96EN9 201 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 EBPLQ9BY08 206 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 ING2Q9H160 280 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 PFDN4Q9NQP4 134 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 IGHV1-45A0A0A0MS14 117 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 IGHV3-20A0A0C4DH32 117 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 ATP6AP2A0A1C7CYW4 349 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 GLOD5A6NK44 160 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 WASHC1A8K0Z3 465 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 ANKRD65E5RJM6 399 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 MASP2O00187 686 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 LDB3O75112 727 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 ATP6AP2O75787 350 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 ANXA4P09525 319 aaPredicted RBP18.12■□□□□ 0.49
PNKP-207ENST00000596014 RRADP55042 308 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 TRA2BP62995 288 aaKnown RBP18.12■□□□□ 0.49
PNKP-207ENST00000596014 PDCD2Q16342 344 aaPredicted RBP18.12■□□□□ 0.49
PNKP-207ENST00000596014 RFTN2Q52LD8 501 aaPredicted RBP18.12■□□□□ 0.49
PNKP-207ENST00000596014 NDUFAF5Q5TEU4 345 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 CPZQ66K79 652 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 NOXRED1Q6NXP6 359 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 CCDC121Q6ZUS5 278 aa18.12■□□□□ 0.49
PNKP-207ENST00000596014 CLNKQ7Z7G1 428 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms