RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 ZCCHC23Q6ZST2 131 aa24.15■■□□□ 1.46
TRIM28-204ENST00000594806 ZBTB9Q96C00 473 aa24.15■■□□□ 1.46
TRIM28-204ENST00000594806 AGAP4Q96P64 663 aa24.15■■□□□ 1.46
TRIM28-204ENST00000594806 SEMA4CQ9C0C4 833 aa24.15■■□□□ 1.46
TRIM28-204ENST00000594806 MCM8Q9UJA3 840 aa24.15■■□□□ 1.46
TRIM28-204ENST00000594806 CLDN16Q9Y5I7 305 aa24.15■■□□□ 1.46
TRIM28-204ENST00000594806 IGHV3-20A0A0C4DH32 117 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 TMEM114B3SHH9 223 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 MASP2O00187 686 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 SLC28A1O00337 649 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 NR2F6P10588 404 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 GSTM5P46439 218 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 IMPG1Q17R60 797 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 BTBD16Q32M84 506 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 HHATQ5VTY9 493 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 KANK2Q63ZY3 851 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 GALNT18Q6P9A2 607 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 ASB18Q6ZVZ8 466 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 KIRREL3Q8IZU9 778 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 C1orf52Q8N6N3 182 aaKnown RBP24.14■■□□□ 1.45
TRIM28-204ENST00000594806 GOLGA6L1Q8N7Z2 621 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 TM9SF4Q92544 642 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 ALOXE3Q9BYJ1 711 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 SHCBP1LQ9BZQ2 653 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 TNFRSF12AQ9NP84 129 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 MMP25Q9NPA2 562 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 ADAP2Q9NPF8 381 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 NKIRAS1Q9NYS0 192 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 VTI1BQ9UEU0 232 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 RALYQ9UKM9 306 aaKnown RBP24.14■■□□□ 1.45
TRIM28-204ENST00000594806 TRAF6Q9Y4K3 522 aa24.14■■□□□ 1.45
TRIM28-204ENST00000594806 A0A1W2PR48 441 aa24.13■■□□□ 1.45
TRIM28-204ENST00000594806 SAGE2PA6NJ88 616 aa24.13■■□□□ 1.45
TRIM28-204ENST00000594806 NPIPB8E9PQR5 432 aa24.13■■□□□ 1.45
TRIM28-204ENST00000594806 RSL1D1O76021 490 aaKnown RBP24.13■■□□□ 1.45
TRIM28-204ENST00000594806 CHRNGP07510 517 aa24.13■■□□□ 1.45
TRIM28-204ENST00000594806 SERPINB3P29508 390 aa24.13■■□□□ 1.45
TRIM28-204ENST00000594806 SLC26A5P58743 744 aa24.13■■□□□ 1.45
TRIM28-204ENST00000594806 IGLV3-21P80748 117 aaPredicted RBP24.13■■□□□ 1.45
TRIM28-204ENST00000594806 CRB2Q5IJ48 1285 aa24.13■■□□□ 1.45
TRIM28-204ENST00000594806 C18orf63Q68DL7 685 aa24.13■■□□□ 1.45
TRIM28-204ENST00000594806 CLEC6AQ6EIG7 209 aa24.13■■□□□ 1.45
TRIM28-204ENST00000594806 IGFL3Q6UXB1 125 aa24.13■■□□□ 1.45
TRIM28-204ENST00000594806 FAM76AQ8TAV0 307 aa24.13■■□□□ 1.45
TRIM28-204ENST00000594806 LMF1Q96S06 567 aa24.13■■□□□ 1.45
TRIM28-204ENST00000594806 ZNF71Q9NQZ8 489 aaPredicted RBP24.13■■□□□ 1.45
TRIM28-204ENST00000594806 TLN1Q9Y490 2541 aaKnown RBP24.13■■□□□ 1.45
TRIM28-204ENST00000594806 WDR91A4D1P6 747 aa24.12■■□□□ 1.45
TRIM28-204ENST00000594806 DPM1O60762 260 aa24.12■■□□□ 1.45
TRIM28-204ENST00000594806 GBAP04062 536 aa24.12■■□□□ 1.45
TRIM28-204ENST00000594806 NEFHP12036 1026 aa24.12■■□□□ 1.45
TRIM28-204ENST00000594806 CHN1P15882 459 aa24.12■■□□□ 1.45
TRIM28-204ENST00000594806 PRPH2P23942 346 aa24.12■■□□□ 1.45
TRIM28-204ENST00000594806 HMGCS1Q01581 520 aa24.12■■□□□ 1.45
TRIM28-204ENST00000594806 ELAVL1Q15717 326 aaKnown RBP24.12■■□□□ 1.45
TRIM28-204ENST00000594806 CHI3L2Q15782 390 aa24.12■■□□□ 1.45
TRIM28-204ENST00000594806 OR52E8Q6IFG1 317 aa24.12■■□□□ 1.45
TRIM28-204ENST00000594806 CLNKQ7Z7G1 428 aa24.12■■□□□ 1.45
TRIM28-204ENST00000594806 TMEM132CQ8N3T6 1108 aa24.12■■□□□ 1.45
TRIM28-204ENST00000594806 ANKRD42Q8N9B4 389 aa24.12■■□□□ 1.45
TRIM28-204ENST00000594806 ANKRD9Q96BM1 317 aaPredicted RBP24.12■■□□□ 1.45
TRIM28-204ENST00000594806 C11orf24Q96F05 449 aaPredicted RBP24.12■■□□□ 1.45
TRIM28-204ENST00000594806 ATP6V1G3Q96LB4 118 aa24.12■■□□□ 1.45
TRIM28-204ENST00000594806 CCT7Q99832 543 aa24.12■■□□□ 1.45
TRIM28-204ENST00000594806 SH3GL2Q99962 352 aa24.12■■□□□ 1.45
TRIM28-204ENST00000594806 PELOQ9BRX2 385 aaKnown RBP24.12■■□□□ 1.45
TRIM28-204ENST00000594806 FAIM2Q9BWQ8 316 aa24.12■■□□□ 1.45
TRIM28-204ENST00000594806 PPIEQ9UNP9 301 aaKnown RBP24.12■■□□□ 1.45
TRIM28-204ENST00000594806 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.12■■□□□ 1.45
TRIM28-204ENST00000594806 SPTA1P02549 2419 aa24.12■■□□□ 1.45
TRIM28-204ENST00000594806 TNRC6AQ8NDV7 1962 aaKnown RBP24.11■■□□□ 1.45
TRIM28-204ENST00000594806 RGS14O43566 566 aa24.11■■□□□ 1.45
TRIM28-204ENST00000594806 LDB3O75112 727 aa24.11■■□□□ 1.45
TRIM28-204ENST00000594806 AIFM1O95831 613 aa24.11■■□□□ 1.45
TRIM28-204ENST00000594806 SPDYAQ5MJ70 313 aa24.11■■□□□ 1.45
TRIM28-204ENST00000594806 SH2D4BQ5SQS7 431 aa24.11■■□□□ 1.45
TRIM28-204ENST00000594806 SCIMPQ6UWF3 145 aa24.11■■□□□ 1.45
TRIM28-204ENST00000594806 ISLR2Q6UXK2 745 aa24.11■■□□□ 1.45
TRIM28-204ENST00000594806 PSMF1Q92530 271 aa24.11■■□□□ 1.45
TRIM28-204ENST00000594806 DAZLQ92904 295 aaKnown RBP24.11■■□□□ 1.45
TRIM28-204ENST00000594806 APIPQ96GX9 242 aa24.11■■□□□ 1.45
TRIM28-204ENST00000594806 PFDN4Q9NQP4 134 aa24.11■■□□□ 1.45
TRIM28-204ENST00000594806 PNO1Q9NRX1 252 aaKnown RBP24.11■■□□□ 1.45
TRIM28-204ENST00000594806 TEKT2Q9UIF3 430 aa24.11■■□□□ 1.45
TRIM28-204ENST00000594806 WBP11Q9Y2W2 641 aaKnown RBP24.11■■□□□ 1.45
TRIM28-204ENST00000594806 DNAJC15Q9Y5T4 150 aa24.11■■□□□ 1.45
TRIM28-204ENST00000594806 CNTRLQ7Z7A1 2325 aa24.1■■□□□ 1.45
TRIM28-204ENST00000594806 C1orf226A1L170 272 aa24.1■■□□□ 1.45
TRIM28-204ENST00000594806 TGFBR3LH3BV60 316 aa24.1■■□□□ 1.45
TRIM28-204ENST00000594806 PCDH7O60245 1069 aa24.1■■□□□ 1.45
TRIM28-204ENST00000594806 HSPA4LO95757 839 aa24.1■■□□□ 1.45
TRIM28-204ENST00000594806 GPR75O95800 540 aa24.1■■□□□ 1.45
TRIM28-204ENST00000594806 IFNA16P05015 189 aa24.1■■□□□ 1.45
TRIM28-204ENST00000594806 COX7A2P14406 83 aa24.1■■□□□ 1.45
TRIM28-204ENST00000594806 TIA1P31483 386 aaKnown RBP eCLIP24.1■■□□□ 1.45
TRIM28-204ENST00000594806 ABCE1P61221 599 aaKnown RBP24.1■■□□□ 1.45
TRIM28-204ENST00000594806 RAPSNQ13702 412 aa24.1■■□□□ 1.45
TRIM28-204ENST00000594806 UGT3A2Q3SY77 523 aa24.1■■□□□ 1.45
TRIM28-204ENST00000594806 NDUFAF5Q5TEU4 345 aa24.1■■□□□ 1.45
TRIM28-204ENST00000594806 FAM219BQ5XKK7 198 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms