RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 OR4N5Q8IXE1 308 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 IFT20Q8IY31 132 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 ZNF321PQ8N8H1 164 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 OR52B6Q8NGF0 335 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 OR14A16Q8NHC5 309 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 WDR20Q8TBZ3 569 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 ATP6V1E2Q96A05 226 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 REPS1Q96D71 796 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 NSUN5Q96P11 429 aaKnown RBP12.92□□□□□ -0.34
APOC1-208ENST00000592535 RHOXF2Q9BQY4 288 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 CCDC77Q9BR77 488 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 CENPKQ9BS16 269 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 ZNF717Q9BY31 904 aaPredicted RBP12.92□□□□□ -0.34
APOC1-208ENST00000592535 LIN28AQ9H9Z2 209 aaKnown RBP12.92□□□□□ -0.34
APOC1-208ENST00000592535 ZBTB26Q9HCK0 441 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 PCTPQ9UKL6 214 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 TMCO1Q9UM00 188 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 GTF3C1Q12789 2109 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 TRGV8A0A0C4DH27 118 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 A0A1B0GUH1 482 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 TMEM200CA6NKL6 621 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 C17orf105B2RV13 164 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 NPIPA5E9PKD4 350 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 RIPK2O43353 540 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 ZG16O60844 167 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 SMIM24O75264 130 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 EEDO75530 441 aaKnown RBP12.91□□□□□ -0.34
APOC1-208ENST00000592535 PRKRAO75569 313 aaKnown RBP12.91□□□□□ -0.34
APOC1-208ENST00000592535 SNRPAP09012 282 aaKnown RBP12.91□□□□□ -0.34
APOC1-208ENST00000592535 SBK3P0C264 359 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 FAM153BP0C7A2 387 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 PTX3P26022 381 aaPredicted RBP12.91□□□□□ -0.34
APOC1-208ENST00000592535 BSGP35613 385 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 CCNG1P51959 295 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 TNFRSF17Q02223 184 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 TRAF3Q13114 568 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 FAM153CQ494X1 144 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 C18orf63Q68DL7 685 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 RPS27LQ71UM5 84 aaKnown RBP12.91□□□□□ -0.34
APOC1-208ENST00000592535 TRMT10CQ7L0Y3 403 aaKnown RBP12.91□□□□□ -0.34
APOC1-208ENST00000592535 GPR180Q86V85 440 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 ZCCHC7Q8N3Z6 543 aaKnown RBP12.91□□□□□ -0.34
APOC1-208ENST00000592535 TMEM156Q8N614 296 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 CPSF7Q8N684 471 aaKnown RBP12.91□□□□□ -0.34
APOC1-208ENST00000592535 FAM98AQ8NCA5 519 aaKnown RBP12.91□□□□□ -0.34
APOC1-208ENST00000592535 LRRN4CLQ8ND94 238 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 MORN4Q8NDC4 146 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 DAZLQ92904 295 aaKnown RBP12.91□□□□□ -0.34
APOC1-208ENST00000592535 RELTQ969Z4 430 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 TMEM125Q96AQ2 219 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 MTFMTQ96DP5 389 aaKnown RBP12.91□□□□□ -0.34
APOC1-208ENST00000592535 GPR137Q96N19 417 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 MRPL57Q9BQC6 102 aaKnown RBP12.91□□□□□ -0.34
APOC1-208ENST00000592535 OR8D2Q9GZM6 311 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 MRPL46Q9H2W6 279 aaKnown RBP12.91□□□□□ -0.34
APOC1-208ENST00000592535 PHF11Q9UIL8 331 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 NPIPA1Q9UND3 350 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 ATG4BQ9Y4P1 393 aa12.91□□□□□ -0.34
APOC1-208ENST00000592535 A0A0A6YYD5 115 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 TMPRSS11DO60235 418 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 OR2J2O76002 312 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 RPS17P08708 135 aaKnown RBP12.9□□□□□ -0.34
APOC1-208ENST00000592535 SSR4P51571 173 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 ARFIP1P53367 373 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 IGLV3-21P80748 117 aaPredicted RBP12.9□□□□□ -0.34
APOC1-208ENST00000592535 FOLH1Q04609 750 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 RBPJQ06330 500 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 CUL3Q13618 768 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 RNFT1Q5M7Z0 435 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 MRM1Q6IN84 353 aaKnown RBP12.9□□□□□ -0.34
APOC1-208ENST00000592535 ADGRD1Q6QNK2 874 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 HSDL2Q6YN16 418 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 SIAH3Q8IW03 269 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 GSPT2Q8IYD1 628 aaKnown RBP12.9□□□□□ -0.34
APOC1-208ENST00000592535 CYP4Z2PQ8N1L4 340 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 TMEM151AQ8N4L1 468 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 SLC2A12Q8TD20 617 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 NTMT1Q9BV86 223 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 RPF2Q9H7B2 306 aaKnown RBP12.9□□□□□ -0.34
APOC1-208ENST00000592535 DDX31Q9H8H2 851 aaKnown RBP12.9□□□□□ -0.34
APOC1-208ENST00000592535 SEMA4BQ9NPR2 832 aaPredicted RBP12.9□□□□□ -0.34
APOC1-208ENST00000592535 MS4A12Q9NXJ0 267 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 PSD3Q9NYI0 1048 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 SH3BGRL2Q9UJC5 107 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 YARS2Q9Y2Z4 477 aaKnown RBP12.9□□□□□ -0.34
APOC1-208ENST00000592535 NAV2Q8IVL1 2488 aa12.9□□□□□ -0.34
APOC1-208ENST00000592535 A0A1B0GTL3 188 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 WASHC1A8K0Z3 465 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 A8MT66 165 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 WWP2O00308 870 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 FOXE1O00358 373 aaPredicted RBP12.89□□□□□ -0.35
APOC1-208ENST00000592535 MLYCDO95822 493 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 GBAP04062 536 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 ZNF24P17028 368 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 CA7P43166 264 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 STT3AP46977 705 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 MEOX1P50221 254 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 HK2P52789 917 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 KRTCAP3Q53RY4 240 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 LGSNQ5TDP6 509 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms