RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 A0A0G2JMM0 328 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 MYOCOSA0A1B0GUC4 107 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 A0A1W2PPB8 328 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 A0A1W2PRS3 328 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 KIR3DP1A8MWS1 328 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 PHGDHO43175 533 aaKnown RBP6.85□□□□□ -1.31
VAT1-209ENST00000592388 PRKNO60260 465 aaPredicted RBP6.85□□□□□ -1.31
VAT1-209ENST00000592388 PRAMEF4O60810 478 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 MYO1DO94832 1006 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 TBX6O95947 436 aaPredicted RBP6.85□□□□□ -1.31
VAT1-209ENST00000592388 ENO2P09104 434 aaPredicted RBP6.85□□□□□ -1.31
VAT1-209ENST00000592388 FAM157CP0CG43 387 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 SMIM10L1P0DMW3 83 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 PYGBP11216 843 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 RNH1P13489 461 aaKnown RBP6.85□□□□□ -1.31
VAT1-209ENST00000592388 IL10P22301 178 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 CERS1P27544 350 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 MLF1P58340 268 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 GPR85P60893 370 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 BTN3A2P78410 334 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 DR1Q01658 176 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 MGAT5Q09328 741 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 PDIA2Q13087 525 aaKnown RBP6.85□□□□□ -1.31
VAT1-209ENST00000592388 RUNX2Q13950 521 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 SLBPQ14493 270 aaKnown RBP eCLIP6.85□□□□□ -1.31
VAT1-209ENST00000592388 PRAMEF9Q5VWM5 478 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 RTL6Q6ICC9 239 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 FRA10AC1Q70Z53 315 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 VN1R5Q7Z5H4 357 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 CLNKQ7Z7G1 428 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 PDIK1LQ8N165 341 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 APCDD1LQ8NCL9 501 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 FBXO36Q8NEA4 188 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 GABPB2Q8TAK5 448 aaPredicted RBP6.85□□□□□ -1.31
VAT1-209ENST00000592388 ATL1Q8WXF7 558 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 CCT6BQ92526 530 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 EXT2Q93063 718 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 RNASE6Q93091 150 aaKnown RBP6.85□□□□□ -1.31
VAT1-209ENST00000592388 ESAMQ96AP7 390 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 SMIM10Q96HG1 83 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 VPS39Q96JC1 886 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 SH3GL2Q99962 352 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 AIF1LQ9BQI0 150 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 NAT9Q9BTE0 207 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 FAM129AQ9BZQ8 928 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 LIN28AQ9H9Z2 209 aaKnown RBP6.85□□□□□ -1.31
VAT1-209ENST00000592388 PELI2Q9HAT8 420 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 PRDM9Q9NQV7 894 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 PNO1Q9NRX1 252 aaKnown RBP6.85□□□□□ -1.31
VAT1-209ENST00000592388 ZFATQ9P243 1243 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 CORO1CQ9ULV4 474 aaPredicted RBP6.85□□□□□ -1.31
VAT1-209ENST00000592388 OARD1Q9Y530 152 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 CLDN16Q9Y5I7 305 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 FAM215AQ9Y5M1 114 aa6.85□□□□□ -1.31
VAT1-209ENST00000592388 PINLYPA6NC86 204 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 CXorf49A8MYA2 514 aaPredicted RBP6.84□□□□□ -1.31
VAT1-209ENST00000592388 PSMD12O00232 456 aaPredicted RBP6.84□□□□□ -1.31
VAT1-209ENST00000592388 TAPBPO15533 448 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 ERI3O43414 337 aaKnown RBP6.84□□□□□ -1.31
VAT1-209ENST00000592388 TLX2O43763 284 aaPredicted RBP6.84□□□□□ -1.31
VAT1-209ENST00000592388 SH3BGRLO75368 114 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 WISP3O95389 354 aaPredicted RBP6.84□□□□□ -1.31
VAT1-209ENST00000592388 SERPINA6P08185 405 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 TCP1P17987 556 aaKnown RBP6.84□□□□□ -1.31
VAT1-209ENST00000592388 CD22P20273 847 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 RPL21P46778 160 aaKnown RBP6.84□□□□□ -1.31
VAT1-209ENST00000592388 SLC6A12P48065 614 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 HSPA7P48741 367 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 CYB561P49447 251 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 ARL4CP56559 192 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 SKP1P63208 163 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 TNK1Q13470 666 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 OR4D1Q15615 310 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 SLCO4C1Q6ZQN7 724 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 MDGA2Q7Z553 956 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 ADAMTSL2Q86TH1 951 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 CREG2Q8IUH2 290 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 SCUBE1Q8IWY4 988 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 TBC1D19Q8N5T2 526 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 POGLUT1Q8NBL1 392 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 RELL2Q8NC24 303 aaPredicted RBP6.84□□□□□ -1.31
VAT1-209ENST00000592388 B3GNT7Q8NFL0 401 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 ROBO4Q8WZ75 1007 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 NCLNQ969V3 563 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 GAL3ST3Q96A11 431 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 RHBDF1Q96CC6 855 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 MS4A6EQ96DS6 147 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 LRRC46Q96FV0 321 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 PDLIM5Q96HC4 596 aaKnown RBP6.84□□□□□ -1.31
VAT1-209ENST00000592388 CCL19Q99731 98 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 MCMBPQ9BTE3 642 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 DEFB126Q9BYW3 111 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 RHOJQ9H4E5 214 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 PRTFDC1Q9NRG1 225 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 PLSCR2Q9NRY7 297 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 ALKBH4Q9NXW9 302 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 WWOXQ9NZC7 414 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 CTNNAL1Q9UBT7 734 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 FBXW2Q9UKT8 454 aa6.84□□□□□ -1.31
VAT1-209ENST00000592388 MTO1Q9Y2Z2 717 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms