RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 KIF18AQ8NI77 898 aa17.04■□□□□ 0.32
CIRBP-237ENST00000592234 UHMK1Q8TAS1 419 aaKnown RBP17.04■□□□□ 0.32
CIRBP-237ENST00000592234 STAG3L4Q8TBR4 150 aa17.04■□□□□ 0.32
CIRBP-237ENST00000592234 KCTD4Q8WVF5 259 aa17.04■□□□□ 0.32
CIRBP-237ENST00000592234 UBE2E3Q969T4 207 aa17.04■□□□□ 0.32
CIRBP-237ENST00000592234 MAPKAP1Q9BPZ7 522 aa17.04■□□□□ 0.32
CIRBP-237ENST00000592234 TBCDQ9BTW9 1192 aa17.04■□□□□ 0.32
CIRBP-237ENST00000592234 MS4A8Q9BY19 250 aa17.04■□□□□ 0.32
CIRBP-237ENST00000592234 OR8D2Q9GZM6 311 aa17.04■□□□□ 0.32
CIRBP-237ENST00000592234 LYRM4Q9HD34 91 aa17.04■□□□□ 0.32
CIRBP-237ENST00000592234 DEPPQ9NTK1 212 aa17.04■□□□□ 0.32
CIRBP-237ENST00000592234 NUDT4Q9NZJ9 180 aa17.04■□□□□ 0.32
CIRBP-237ENST00000592234 KIF2AO00139 706 aaPredicted RBP17.03■□□□□ 0.32
CIRBP-237ENST00000592234 RTCAO00442 366 aaKnown RBP17.03■□□□□ 0.32
CIRBP-237ENST00000592234 SH3BGRLO75368 114 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 PDE9AO76083 593 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 OR6B1O95007 311 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 PCNAP12004 261 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 CRABP2P29373 138 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 SOX3P41225 446 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 PLGLB1Q02325 96 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 SERTAD2Q14140 314 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 ARHGAP11AQ6P4F7 1023 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 PAOXQ6QHF9 649 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 UBE3DQ7Z6J8 389 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 ZNF295-AS1Q8N0V1 137 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 ACOT4Q8N9L9 421 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 ZNF473Q8WTR7 871 aaKnown RBP17.03■□□□□ 0.32
CIRBP-237ENST00000592234 PTPMT1Q8WUK0 201 aaPredicted RBP17.03■□□□□ 0.32
CIRBP-237ENST00000592234 NXNL1Q96CM4 212 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 RASL10BQ96S79 203 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 FMO2Q99518 471 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 DEFB127Q9H1M4 99 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 IGSF5Q9NSI5 407 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 ADGRG4Q8IZF6 3080 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 HCFC1P51610 2035 aa17.03■□□□□ 0.32
CIRBP-237ENST00000592234 OTOGQ6ZRI0 2925 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 C17orf105B2RV13 164 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 UBXN8O00124 270 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 ACOT7O00154 380 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 TGFB1P01137 390 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 LTA4HP09960 611 aaKnown RBP17.02■□□□□ 0.32
CIRBP-237ENST00000592234 ATP5A1P25705 553 aaKnown RBP17.02■□□□□ 0.32
CIRBP-237ENST00000592234 ECHS1P30084 290 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 SSTR2P30874 369 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 CASP2P42575 452 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 HK2P52789 917 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 E2F2Q14209 437 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 AP5B1Q2VPB7 878 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 TMEM35AQ53FP2 167 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 TMEM211Q6ICI0 200 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 MED27Q6P2C8 311 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 CHSY3Q70JA7 882 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 ISCA2Q86U28 154 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 ZNF321PQ8N8H1 164 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 OR2M7Q8NG81 312 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 TP63Q9H3D4 680 aaPredicted RBP17.02■□□□□ 0.32
CIRBP-237ENST00000592234 NMRAL1Q9HBL8 299 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 SNX15Q9NRS6 342 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 PLSCR2Q9NRY7 297 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 OPTCQ9UBM4 332 aa17.02■□□□□ 0.32
CIRBP-237ENST00000592234 INTS1Q8N201 2190 aaKnown RBP17.01■□□□□ 0.31
CIRBP-237ENST00000592234 HMX2A2RU54 273 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 PINLYPA6NC86 204 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 FAM166BA8MTA8 275 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 C2P06681 752 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 HIST1H1TP22492 207 aaPredicted RBP17.01■□□□□ 0.31
CIRBP-237ENST00000592234 CPN2P22792 545 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 SSR2P43308 183 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 PPIAP62937 165 aaKnown RBP17.01■□□□□ 0.31
CIRBP-237ENST00000592234 RNF4P78317 190 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 ID2Q02363 134 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 ZNF750Q32MQ0 723 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 CEP128Q6ZU80 1094 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 LAS2Q8IYD9 372 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 C7orf57Q8NEG2 295 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 OR5L2Q8NGL0 311 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 OR8K3Q8NH51 312 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 SLC2A12Q8TD20 617 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 CMTM7Q96FZ5 175 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 ATOH8Q96SQ7 321 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 SPOCK3Q9BQ16 436 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 ACSS3Q9H6R3 686 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 COPS7AQ9UBW8 275 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 ACOT9Q9Y305 439 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 HRH3Q9Y5N1 445 aa17.01■□□□□ 0.31
CIRBP-237ENST00000592234 G3V3Y1 287 aa17■□□□□ 0.31
CIRBP-237ENST00000592234 K7EPI3 171 aa17■□□□□ 0.31
CIRBP-237ENST00000592234 SAP18O00422 153 aaKnown RBP17■□□□□ 0.31
CIRBP-237ENST00000592234 KERAO60938 352 aa17■□□□□ 0.31
CIRBP-237ENST00000592234 SCELO95171 688 aa17■□□□□ 0.31
CIRBP-237ENST00000592234 COX7A2P14406 83 aa17■□□□□ 0.31
CIRBP-237ENST00000592234 SERPINB1P30740 379 aa17■□□□□ 0.31
CIRBP-237ENST00000592234 GLE1Q53GS7 698 aaKnown RBP17■□□□□ 0.31
CIRBP-237ENST00000592234 RTL4Q6ZR62 310 aa17■□□□□ 0.31
CIRBP-237ENST00000592234 RGS9BPQ6ZS82 235 aa17■□□□□ 0.31
CIRBP-237ENST00000592234 GK5Q6ZS86 529 aa17■□□□□ 0.31
CIRBP-237ENST00000592234 SLC22A16Q86VW1 577 aa17■□□□□ 0.31
CIRBP-237ENST00000592234 CENPLQ8N0S6 344 aaPredicted RBP17■□□□□ 0.31
CIRBP-237ENST00000592234 MARVELD2Q8N4S9 558 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms