RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 CLCA3PQ9Y6N3 262 aa25.4■■□□□ 1.66
SMAD4-213ENST00000591914 DOPEY2Q9Y3R5 2298 aa25.39■■□□□ 1.66
SMAD4-213ENST00000591914 A0A1W2PPM1 405 aa25.39■■□□□ 1.66
SMAD4-213ENST00000591914 RASAL1O95294 804 aa25.39■■□□□ 1.66
SMAD4-213ENST00000591914 TSPAN8P19075 237 aa25.39■■□□□ 1.66
SMAD4-213ENST00000591914 HSD17B3P37058 310 aa25.39■■□□□ 1.66
SMAD4-213ENST00000591914 IGLV3-21P80748 117 aaPredicted RBP25.39■■□□□ 1.66
SMAD4-213ENST00000591914 TNFRSF17Q02223 184 aa25.39■■□□□ 1.66
SMAD4-213ENST00000591914 IFT88Q13099 833 aa25.39■■□□□ 1.66
SMAD4-213ENST00000591914 RASA2Q15283 850 aa25.39■■□□□ 1.66
SMAD4-213ENST00000591914 UNC50Q53HI1 259 aa25.39■■□□□ 1.66
SMAD4-213ENST00000591914 ZNF678Q5SXM1 525 aa25.39■■□□□ 1.66
SMAD4-213ENST00000591914 TTC19Q6DKK2 380 aaPredicted RBP25.39■■□□□ 1.66
SMAD4-213ENST00000591914 C7orf57Q8NEG2 295 aa25.39■■□□□ 1.66
SMAD4-213ENST00000591914 MYRIPQ8NFW9 859 aa25.39■■□□□ 1.66
SMAD4-213ENST00000591914 PRR7Q8TB68 274 aa25.39■■□□□ 1.66
SMAD4-213ENST00000591914 DAZLQ92904 295 aaKnown RBP25.39■■□□□ 1.66
SMAD4-213ENST00000591914 TMEM237Q96Q45 408 aa25.39■■□□□ 1.66
SMAD4-213ENST00000591914 RPF2Q9H7B2 306 aaKnown RBP25.39■■□□□ 1.66
SMAD4-213ENST00000591914 TRIM45Q9H8W5 580 aaPredicted RBP25.39■■□□□ 1.66
SMAD4-213ENST00000591914 LYARQ9NX58 379 aaKnown RBP25.39■■□□□ 1.66
SMAD4-213ENST00000591914 DCDC2Q9UHG0 476 aa25.39■■□□□ 1.66
SMAD4-213ENST00000591914 ZNF225Q9UK10 706 aa25.39■■□□□ 1.66
SMAD4-213ENST00000591914 ASB4Q9Y574 426 aa25.39■■□□□ 1.66
SMAD4-213ENST00000591914 HIVEP3Q5T1R4 2406 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 MYOCOSA0A1B0GUC4 107 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 PROM1O43490 865 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 TMPRSS11DO60235 418 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 FGF17O60258 216 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 ZNF500O60304 480 aaPredicted RBP25.38■■□□□ 1.65
SMAD4-213ENST00000591914 NEURL1O76050 574 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 TRHRP34981 398 aaPredicted RBP25.38■■□□□ 1.65
SMAD4-213ENST00000591914 OC90Q02509 493 aaPredicted RBP25.38■■□□□ 1.65
SMAD4-213ENST00000591914 CLCQ05315 142 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 ELOAQ14241 798 aaKnown RBP25.38■■□□□ 1.65
SMAD4-213ENST00000591914 ZNF468Q5VIY5 522 aaPredicted RBP25.38■■□□□ 1.65
SMAD4-213ENST00000591914 C18orf63Q68DL7 685 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 SPINK14Q6IE38 97 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 NUDT13Q86X67 352 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 SLC22A9Q8IVM8 553 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 MORN4Q8NDC4 146 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 OR14A16Q8NHC5 309 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 TRPC4APQ8TEL6 797 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 TANKQ92844 425 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 SCMH1Q96GD3 660 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 ELOVL6Q9H5J4 265 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 TRPS1Q9UHF7 1281 aa25.38■■□□□ 1.65
SMAD4-213ENST00000591914 FOXO6A8MYZ6 492 aa25.37■■□□□ 1.65
SMAD4-213ENST00000591914 SEMA7AO75326 666 aa25.37■■□□□ 1.65
SMAD4-213ENST00000591914 SUPT7LO94864 414 aa25.37■■□□□ 1.65
SMAD4-213ENST00000591914 FAM58BPP0C7Q3 252 aa25.37■■□□□ 1.65
SMAD4-213ENST00000591914 IMPDH1P20839 514 aa25.37■■□□□ 1.65
SMAD4-213ENST00000591914 TLX1P31314 330 aaPredicted RBP25.37■■□□□ 1.65
SMAD4-213ENST00000591914 SLCO1A2P46721 670 aa25.37■■□□□ 1.65
SMAD4-213ENST00000591914 PRKAA2P54646 552 aa25.37■■□□□ 1.65
SMAD4-213ENST00000591914 ID2Q02363 134 aa25.37■■□□□ 1.65
SMAD4-213ENST00000591914 HORMAD2Q8N7B1 307 aa25.37■■□□□ 1.65
SMAD4-213ENST00000591914 DNAJB8Q8NHS0 232 aa25.37■■□□□ 1.65
SMAD4-213ENST00000591914 NR4A3Q92570 626 aa25.37■■□□□ 1.65
SMAD4-213ENST00000591914 LRFN1Q9P244 771 aa25.37■■□□□ 1.65
SMAD4-213ENST00000591914 EMCNQ9ULC0 261 aa25.37■■□□□ 1.65
SMAD4-213ENST00000591914 POLEQ07864 2286 aa25.37■■□□□ 1.65
SMAD4-213ENST00000591914 FCHO1O14526 889 aa25.36■■□□□ 1.65
SMAD4-213ENST00000591914 AGFG2O95081 481 aa25.36■■□□□ 1.65
SMAD4-213ENST00000591914 CD46P15529 392 aa25.36■■□□□ 1.65
SMAD4-213ENST00000591914 BUD31P41223 144 aaPredicted RBP25.36■■□□□ 1.65
SMAD4-213ENST00000591914 TDGF1P3P51864 188 aa25.36■■□□□ 1.65
SMAD4-213ENST00000591914 VSNL1P62760 191 aa25.36■■□□□ 1.65
SMAD4-213ENST00000591914 CYP20A1Q6UW02 462 aa25.36■■□□□ 1.65
SMAD4-213ENST00000591914 EPS8L3Q8TE67 593 aaKnown RBP25.36■■□□□ 1.65
SMAD4-213ENST00000591914 THAP3Q8WTV1 239 aaPredicted RBP25.36■■□□□ 1.65
SMAD4-213ENST00000591914 L3HYPDHQ96EM0 354 aa25.36■■□□□ 1.65
SMAD4-213ENST00000591914 HES7Q9BYE0 225 aa25.36■■□□□ 1.65
SMAD4-213ENST00000591914 FARSBQ9NSD9 589 aaKnown RBP25.36■■□□□ 1.65
SMAD4-213ENST00000591914 SNX6Q9UNH7 406 aa25.36■■□□□ 1.65
SMAD4-213ENST00000591914 A0A1W2PR48 441 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 C17orf105B2RV13 164 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 PRKNO60260 465 aaPredicted RBP25.35■■□□□ 1.65
SMAD4-213ENST00000591914 GLRA3O75311 464 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 PRKRAO75569 313 aaKnown RBP25.35■■□□□ 1.65
SMAD4-213ENST00000591914 ZFAND5O76080 213 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 DDAH2O95865 285 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 CRYABP02511 175 aaKnown RBP25.35■■□□□ 1.65
SMAD4-213ENST00000591914 STT3AP46977 705 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 CYB561P49447 251 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 HLCSP50747 726 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 FOLH1Q04609 750 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 BIKQ13323 160 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 SGO1Q5FBB7 561 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 ZNF227Q86WZ6 799 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 OR4N5Q8IXE1 308 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 C5orf34Q96MH7 638 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 ZNF382Q96SR6 550 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 MRPL1Q9BYD6 325 aaKnown RBP25.35■■□□□ 1.65
SMAD4-213ENST00000591914 BRF2Q9HAW0 419 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 KLHL1Q9NR64 748 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 ADAM29Q9UKF5 820 aa25.35■■□□□ 1.65
SMAD4-213ENST00000591914 USP9YO00507 2555 aaPredicted RBP25.34■■□□□ 1.65
SMAD4-213ENST00000591914 TMEM200CA6NKL6 621 aa25.34■■□□□ 1.65
SMAD4-213ENST00000591914 SMIM23A6NLE4 172 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms