RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 APCDD1LQ8NCL9 501 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 B3GNT7Q8NFL0 401 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 OR1N1Q8NGS0 311 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 SELENOMQ8WWX9 145 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 TANKQ92844 425 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 ANKRD9Q96BM1 317 aaPredicted RBP8.59□□□□□ -1.03
DNMT1-223ENST00000591239 C19orf60Q96EN9 201 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 NPAS2Q99743 824 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 MRPL1Q9BYD6 325 aaKnown RBP8.59□□□□□ -1.03
DNMT1-223ENST00000591239 ROPN1BQ9BZX4 212 aaPredicted RBP8.59□□□□□ -1.03
DNMT1-223ENST00000591239 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.59□□□□□ -1.03
DNMT1-223ENST00000591239 GSTO2Q9H4Y5 243 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 CDCP1Q9H5V8 836 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 CLMPQ9H6B4 373 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 RPF2Q9H7B2 306 aaKnown RBP8.59□□□□□ -1.03
DNMT1-223ENST00000591239 ROPN1Q9HAT0 212 aaPredicted RBP8.59□□□□□ -1.03
DNMT1-223ENST00000591239 BRF2Q9HAW0 419 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 ADAP2Q9NPF8 381 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 LYARQ9NX58 379 aaKnown RBP8.59□□□□□ -1.03
DNMT1-223ENST00000591239 VTI1BQ9UEU0 232 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 LGALS13Q9UHV8 139 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 PHF11Q9UIL8 331 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 RAB21Q9UL25 225 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 ASB4Q9Y574 426 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 COPG1Q9Y678 874 aaKnown RBP8.59□□□□□ -1.03
DNMT1-223ENST00000591239 CLCA3PQ9Y6N3 262 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 CPAMD8Q8IZJ3 1885 aa8.59□□□□□ -1.03
DNMT1-223ENST00000591239 TRAV17A0A0B4J275 112 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 A0A1W2PR48 441 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 OR5H15A6NDH6 313 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 MANBAO00462 879 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 FGF17O60258 216 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 MAN1A2O60476 641 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 VPS4BO75351 444 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 KRT6AP02538 564 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 KRT6BP04259 564 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 KLK1P06870 262 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 CPA3P15088 417 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 BUD31P41223 144 aaPredicted RBP8.58□□□□□ -1.04
DNMT1-223ENST00000591239 KRT6CP48668 564 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 ST13P50502 369 aaKnown RBP8.58□□□□□ -1.04
DNMT1-223ENST00000591239 CLCN2P51788 898 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 GPR143P51810 404 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 PKNOX1P55347 436 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 DNAJB13P59910 316 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 TNFRSF17Q02223 184 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 ID2Q02363 134 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 LCP2Q13094 533 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 TCHHL1Q5QJ38 904 aaPredicted RBP8.58□□□□□ -1.04
DNMT1-223ENST00000591239 FAM219BQ5XKK7 198 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 RPUSD3Q6P087 351 aaKnown RBP8.58□□□□□ -1.04
DNMT1-223ENST00000591239 PAGE2Q7Z2X7 111 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 TRABD2AQ86V40 505 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 ATCAYQ86WG3 371 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 RPS19BP1Q86WX3 136 aaKnown RBP8.58□□□□□ -1.04
DNMT1-223ENST00000591239 NUDT13Q86X67 352 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 OR4N5Q8IXE1 308 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 SRRM1Q8IYB3 904 aaKnown RBP8.58□□□□□ -1.04
DNMT1-223ENST00000591239 LGI4Q8N135 537 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 METTL4Q8N3J2 472 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 TMEM132CQ8N3T6 1108 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 CCDC63Q8NA47 563 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 GALNT11Q8NCW6 608 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 SUN3Q8TAQ9 357 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 RDH11Q8TC12 318 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 METTL6Q8TCB7 284 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 PTPMT1Q8WUK0 201 aaPredicted RBP8.58□□□□□ -1.04
DNMT1-223ENST00000591239 DAZLQ92904 295 aaKnown RBP8.58□□□□□ -1.04
DNMT1-223ENST00000591239 NCLNQ969V3 563 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 HBEGFQ99075 208 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 BARD1Q99728 777 aaKnown RBP8.58□□□□□ -1.04
DNMT1-223ENST00000591239 DEFB126Q9BYW3 111 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 SLC29A3Q9BZD2 475 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 ASF1BQ9NVP2 202 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 OXSMQ9NWU1 459 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 NMRK1Q9NWW6 199 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 MKS1Q9NXB0 559 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 AHSPQ9NZD4 102 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 ABI3Q9P2A4 366 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 ADAM29Q9UKF5 820 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 VPS4AQ9UN37 437 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 PPIEQ9UNP9 301 aaKnown RBP8.58□□□□□ -1.04
DNMT1-223ENST00000591239 SLC12A4Q9UP95 1085 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 STK38LQ9Y2H1 464 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 NTNG1Q9Y2I2 539 aa8.58□□□□□ -1.04
DNMT1-223ENST00000591239 SHANK1Q9Y566 2161 aa8.57□□□□□ -1.04
DNMT1-223ENST00000591239 TRBV11-1A0A0K0K1C0 115 aa8.57□□□□□ -1.04
DNMT1-223ENST00000591239 ARHGAP10A1A4S6 786 aa8.57□□□□□ -1.04
DNMT1-223ENST00000591239 GLOD5A6NK44 160 aa8.57□□□□□ -1.04
DNMT1-223ENST00000591239 WASHC1A8K0Z3 465 aa8.57□□□□□ -1.04
DNMT1-223ENST00000591239 GABRR3A8MPY1 467 aa8.57□□□□□ -1.04
DNMT1-223ENST00000591239 TCP11X1B4DZS4 312 aa8.57□□□□□ -1.04
DNMT1-223ENST00000591239 UBFD1O14562 309 aaKnown RBP8.57□□□□□ -1.04
DNMT1-223ENST00000591239 PRAMEF2O60811 474 aa8.57□□□□□ -1.04
DNMT1-223ENST00000591239 ULK1O75385 1050 aa8.57□□□□□ -1.04
DNMT1-223ENST00000591239 PRKRAO75569 313 aaKnown RBP8.57□□□□□ -1.04
DNMT1-223ENST00000591239 ESRRBO95718 433 aa8.57□□□□□ -1.04
DNMT1-223ENST00000591239 AIFM1O95831 613 aa8.57□□□□□ -1.04
DNMT1-223ENST00000591239 ENO1P06733 434 aaKnown RBP8.57□□□□□ -1.04
DNMT1-223ENST00000591239 TUBBP07437 444 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms