RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 NAB1Q13506 487 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 ART3Q13508 389 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 SETDB1Q15047 1291 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 PFKFB4Q16877 469 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 PAGE2BQ5JRK9 111 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 KHDRBS2Q5VWX1 349 aaKnown RBP11.76□□□□□ -0.53
RFX1-207ENST00000589937 C18orf63Q68DL7 685 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 MED27Q6P2C8 311 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 IL20RBQ6UXL0 311 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 RPS27LQ71UM5 84 aaKnown RBP11.76□□□□□ -0.53
RFX1-207ENST00000589937 CD163Q86VB7 1156 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 DOLPP1Q86YN1 238 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 PLD6Q8N2A8 252 aaKnown RBP11.76□□□□□ -0.53
RFX1-207ENST00000589937 GHDCQ8N2G8 530 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 MARVELD2Q8N4S9 558 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 NOA1Q8NC60 698 aaKnown RBP11.76□□□□□ -0.53
RFX1-207ENST00000589937 OR52N2Q8NGI0 321 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 UCN3Q969E3 161 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 SEC16BQ96JE7 1060 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 GPR78Q96P69 363 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 RASL10BQ96S79 203 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 CCDC77Q9BR77 488 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 ZNF717Q9BY31 904 aaPredicted RBP11.76□□□□□ -0.53
RFX1-207ENST00000589937 LYRM4Q9HD34 91 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 CPSF2Q9P2I0 782 aaKnown RBP11.76□□□□□ -0.53
RFX1-207ENST00000589937 KLF13Q9Y2Y9 288 aaPredicted RBP11.76□□□□□ -0.53
RFX1-207ENST00000589937 LIPGQ9Y5X9 500 aa11.76□□□□□ -0.53
RFX1-207ENST00000589937 A0A096LPK6 155 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 GLOD5A6NK44 160 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 A8MVJ9 347 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 CTNSO60931 367 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 ACSL3O95573 720 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 ESRRAP11474 423 aaPredicted RBP11.75□□□□□ -0.53
RFX1-207ENST00000589937 GFAPP14136 432 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 CPN2P22792 545 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 CASP6P55212 293 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 RPS13P62277 151 aaKnown RBP11.75□□□□□ -0.53
RFX1-207ENST00000589937 TGM3Q08188 693 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 STX4Q12846 297 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 ILF2Q12905 390 aaKnown RBP11.75□□□□□ -0.53
RFX1-207ENST00000589937 LAPTM5Q13571 262 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 NAA30Q147X3 362 aaPredicted RBP11.75□□□□□ -0.53
RFX1-207ENST00000589937 HIST2H2ACQ16777 129 aaPredicted RBP11.75□□□□□ -0.53
RFX1-207ENST00000589937 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.75□□□□□ -0.53
RFX1-207ENST00000589937 ZNF750Q32MQ0 723 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 KRTCAP3Q53RY4 240 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 TECRLQ5HYJ1 363 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 HIST2H2AA3Q6FI13 130 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 RPTNQ6XPR3 784 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 HSDL2Q6YN16 418 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 GOLGA7Q7Z5G4 137 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 C9orf40Q8IXQ3 194 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 PSD4Q8NDX1 1056 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 UHMK1Q8TAS1 419 aaKnown RBP11.75□□□□□ -0.53
RFX1-207ENST00000589937 ASB15Q8WXK1 588 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 PPWD1Q96BP3 646 aaKnown RBP11.75□□□□□ -0.53
RFX1-207ENST00000589937 NSUN5Q96P11 429 aaKnown RBP11.75□□□□□ -0.53
RFX1-207ENST00000589937 CDK15Q96Q40 435 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 DMRTA2Q96SC8 542 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 TBCDQ9BTW9 1192 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 HPF1Q9NWY4 346 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 MYOTQ9UBF9 498 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 VTI1BQ9UEU0 232 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 DMGDHQ9UI17 866 aaKnown RBP11.75□□□□□ -0.53
RFX1-207ENST00000589937 ERVK-11Q9UQG0 969 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 ACOT9Q9Y305 439 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 ATG4BQ9Y4P1 393 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 KLF2Q9Y5W3 355 aaPredicted RBP11.75□□□□□ -0.53
RFX1-207ENST00000589937 CLCA3PQ9Y6N3 262 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 KIAA1549Q9HCM3 1950 aa11.75□□□□□ -0.53
RFX1-207ENST00000589937 A0A087X1B8 175 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 TMPRSS11DO60235 418 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 ZFAND5O76080 213 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 LRATO95237 230 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 GBAP04062 536 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 TPOP07202 933 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 CELA3AP09093 270 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 CCL3P10147 92 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 EPB42P16452 691 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 ECHS1P30084 290 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 SERPINB8P50452 374 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 NEK2P51955 445 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 RAP1GDS1P52306 607 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 RNF4P78317 190 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 TNFRSF17Q02223 184 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 FOLH1Q04609 750 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 SLAMF1Q13291 335 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 CPSF6Q16630 551 aaKnown RBP eCLIP11.74□□□□□ -0.53
RFX1-207ENST00000589937 ZNF630Q2M218 657 aaPredicted RBP11.74□□□□□ -0.53
RFX1-207ENST00000589937 TMEM35AQ53FP2 167 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 SLC34A3Q8N130 599 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 TMEM132CQ8N3T6 1108 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 ZFP62Q8NB50 900 aaPredicted RBP11.74□□□□□ -0.53
RFX1-207ENST00000589937 OR2M7Q8NG81 312 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 OR52B6Q8NGF0 335 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 OR14A16Q8NHC5 309 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 ZNF721Q8TF20 911 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 CMTM7Q96FZ5 175 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 SCYL1Q96KG9 808 aa11.74□□□□□ -0.53
RFX1-207ENST00000589937 TRIM8Q9BZR9 551 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms