RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 QSOX2Q6ZRP7 698 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 SHISA5Q8N114 240 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 C7orf57Q8NEG2 295 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 CLHC1Q8NHS4 586 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 METTL21AQ8WXB1 218 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 VN1R1Q9GZP7 353 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 MIEF1Q9NQG6 463 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 PRDM9Q9NQV7 894 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 LANCL2Q9NS86 450 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 SEMA3GQ9NS98 782 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 BAIAP2L1Q9UHR4 511 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 PSME2Q9UL46 239 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 FER1L5A0AVI2 2057 aa12.82□□□□□ -0.36
VMP1-210ENST00000589823 SEC16AO15027 2179 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 NCOR2Q9Y618 2525 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 SYNDIG1LA6NDD5 238 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 TMEM8BA6NDV4 472 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 GLOD5A6NK44 160 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 SRRM3A6NNA2 597 aaPredicted RBP12.81□□□□□ -0.36
VMP1-210ENST00000589823 E9PBE3 544 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 PCDH17O14917 1159 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 PGRMC2O15173 223 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 KLHL41O60662 606 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 CTNSO60931 367 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 PRKRAO75569 313 aaKnown RBP12.81□□□□□ -0.36
VMP1-210ENST00000589823 IDO1P14902 403 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 DDX5P17844 614 aaKnown RBP12.81□□□□□ -0.36
VMP1-210ENST00000589823 DDCP20711 480 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 HPCAL1P37235 193 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 RPL3P39023 403 aaKnown RBP12.81□□□□□ -0.36
VMP1-210ENST00000589823 HNRNPFP52597 415 aaKnown RBP12.81□□□□□ -0.36
VMP1-210ENST00000589823 DIO3P55073 304 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 FOXL2P58012 376 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 STX1BP61266 288 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 BTG2P78543 158 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 FOXK2Q01167 660 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 RHAGQ02094 409 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 ACTN3Q08043 901 aaPredicted RBP12.81□□□□□ -0.36
VMP1-210ENST00000589823 STX4Q12846 297 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 SSPNQ14714 243 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 GSTA3Q16772 222 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 BROXQ5VW32 411 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 LRRC69Q6ZNQ3 347 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 RIPOR1Q6ZS17 1223 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 SPATA21Q7Z572 469 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 LAPTM4BQ86VI4 370 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 TMEM52Q8NDY8 209 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 PLPP5Q8NEB5 264 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.81□□□□□ -0.36
VMP1-210ENST00000589823 ZCCHC14Q8WYQ9 949 aaKnown RBP12.81□□□□□ -0.36
VMP1-210ENST00000589823 EGLN2Q96KS0 407 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 PTCHD1Q96NR3 888 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 DCBLD2Q96PD2 775 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 CCNL2Q96S94 520 aaPredicted RBP12.81□□□□□ -0.36
VMP1-210ENST00000589823 ELAC2Q9BQ52 826 aaKnown RBP12.81□□□□□ -0.36
VMP1-210ENST00000589823 EPN3Q9H201 632 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 KCNK13Q9HB14 408 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 AIG1Q9NVV5 245 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 C19orf25Q9UFG5 118 aaPredicted RBP12.81□□□□□ -0.36
VMP1-210ENST00000589823 IL17BQ9UHF5 180 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 G3BP2Q9UN86 482 aaKnown RBP12.81□□□□□ -0.36
VMP1-210ENST00000589823 TRIM33Q9UPN9 1127 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 MAPRE3Q9UPY8 281 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 MRPS18BQ9Y676 258 aaKnown RBP12.81□□□□□ -0.36
VMP1-210ENST00000589823 AKAP13Q12802 2813 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 AHCTF1Q8WYP5 2266 aa12.81□□□□□ -0.36
VMP1-210ENST00000589823 OR2W5A6NFC9 320 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 AKAP10O43572 662 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 SHOX2O60902 331 aaPredicted RBP12.8□□□□□ -0.36
VMP1-210ENST00000589823 LDB3O75112 727 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 ALOX12BO75342 701 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 CREG1O75629 220 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 LRATO95237 230 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 CAPNS1P04632 268 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 UMODP07911 640 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 ALDOCP09972 364 aaKnown RBP12.8□□□□□ -0.36
VMP1-210ENST00000589823 C8orf89P0DMQ9 161 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 NCF2P19878 526 aaPredicted RBP12.8□□□□□ -0.36
VMP1-210ENST00000589823 PRPS1L1P21108 318 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 MAOAP21397 527 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 PIK3R1P27986 724 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 OTX2P32243 289 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 EIF2S3P41091 472 aaKnown RBP12.8□□□□□ -0.36
VMP1-210ENST00000589823 CLDN8P56748 225 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 IRX1P78414 480 aaPredicted RBP12.8□□□□□ -0.36
VMP1-210ENST00000589823 MC1RQ01726 317 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 FOLH1Q04609 750 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 BIKQ13323 160 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 SERTAD2Q14140 314 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 PTGR1Q14914 329 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 NSDHLQ15738 373 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 FAM69BQ5VUD6 431 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 TMEM198Q66K66 360 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 FAAH2Q6GMR7 532 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 SLC48A1Q6P1K1 146 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 R3HCC1LQ7Z5L2 792 aaKnown RBP12.8□□□□□ -0.36
VMP1-210ENST00000589823 CLNKQ7Z7G1 428 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 RAB43Q86YS6 212 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 SCUBE1Q8IWY4 988 aa12.8□□□□□ -0.36
VMP1-210ENST00000589823 MMP21Q8N119 569 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms