RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 Q0VFX4 171 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 RUNX2Q13950 521 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 AP5B1Q2VPB7 878 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 BTBD16Q32M84 506 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 NADK2Q4G0N4 442 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 SFT2D3Q587I9 215 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 KHDRBS2Q5VWX1 349 aaKnown RBP9.74□□□□□ -0.85
SDF2-208ENST00000589788 TTC19Q6DKK2 380 aaPredicted RBP9.74□□□□□ -0.85
SDF2-208ENST00000589788 JMJD6Q6NYC1 403 aaPredicted RBP9.74□□□□□ -0.85
SDF2-208ENST00000589788 ABHD17CQ6PCB6 329 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 ISLR2Q6UXK2 745 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 QSOX2Q6ZRP7 698 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 EXOC3L1Q86VI1 746 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 SRRM1Q8IYB3 904 aaKnown RBP9.74□□□□□ -0.85
SDF2-208ENST00000589788 L3MBTL4Q8NA19 623 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 HUS1BQ8NHY5 278 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 TSLPQ969D9 159 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 QRFPRQ96P65 431 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 LPAR4Q99677 370 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 TBCDQ9BTW9 1192 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 TRIM4Q9C037 500 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 EPN3Q9H201 632 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 OR51B5Q9H339 312 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 EPS8L2Q9H6S3 715 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 SSU72Q9NP77 194 aaKnown RBP9.74□□□□□ -0.85
SDF2-208ENST00000589788 SEMA4BQ9NPR2 832 aaPredicted RBP9.74□□□□□ -0.85
SDF2-208ENST00000589788 DMRT3Q9NQL9 472 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 RNF11Q9Y3C5 154 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 TSC22D4Q9Y3Q8 395 aa9.74□□□□□ -0.85
SDF2-208ENST00000589788 FASNP49327 2511 aaKnown RBP9.74□□□□□ -0.85
SDF2-208ENST00000589788 FOXO6A8MYZ6 492 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 H3BQF6 201 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 SAP18O00422 153 aaKnown RBP9.73□□□□□ -0.85
SDF2-208ENST00000589788 OR7A17O14581 309 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 TBX6O95947 436 aaPredicted RBP9.73□□□□□ -0.85
SDF2-208ENST00000589788 OTCP00480 354 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 RPS17P08708 135 aaKnown RBP9.73□□□□□ -0.85
SDF2-208ENST00000589788 SBK3P0C264 359 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 KRT4P19013 534 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 MAOAP21397 527 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 ATP5F1P24539 256 aaPredicted RBP9.73□□□□□ -0.85
SDF2-208ENST00000589788 PTX3P26022 381 aaPredicted RBP9.73□□□□□ -0.85
SDF2-208ENST00000589788 CERS1P27544 350 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 DNAJA1P31689 397 aaKnown RBP9.73□□□□□ -0.85
SDF2-208ENST00000589788 CCT5P48643 541 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 LIM2P55344 173 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 RAB38P57729 211 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 MAGOHP61326 146 aaKnown RBP9.73□□□□□ -0.85
SDF2-208ENST00000589788 HERVK_113P63132 956 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 BTG2P78543 158 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 SLC13A2Q13183 592 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 ZRSR2Q15696 482 aaKnown RBP9.73□□□□□ -0.85
SDF2-208ENST00000589788 EXT1Q16394 746 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 CRB2Q5IJ48 1285 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 DEPDC1Q5TB30 811 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 SLC6A19Q695T7 634 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 PLAG1Q6DJT9 500 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 PAPD4Q6PIY7 484 aaKnown RBP9.73□□□□□ -0.85
SDF2-208ENST00000589788 LYPD4Q6UWN0 246 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 IGFL3Q6UXB1 125 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 LINC00696Q6ZRV3 163 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 SH2D5Q6ZV89 423 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 MILR1Q7Z6M3 343 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 SLC22A9Q8IVM8 553 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 TRIM42Q8IWZ5 723 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 TMEM151AQ8N4L1 468 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 SIRT6Q8N6T7 355 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 RBMXL3Q8N7X1 1067 aaKnown RBP9.73□□□□□ -0.85
SDF2-208ENST00000589788 FAM47BQ8NA70 645 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 OR52B6Q8NGF0 335 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 BRIX1Q8TDN6 353 aaKnown RBP9.73□□□□□ -0.85
SDF2-208ENST00000589788 RGMAQ96B86 450 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 IMMP1LQ96LU5 166 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 MAGEB10Q96LZ2 347 aaPredicted RBP9.73□□□□□ -0.85
SDF2-208ENST00000589788 LMF1Q96S06 567 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 SMC6Q96SB8 1091 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 NTMT1Q9BV86 223 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 ERVK-6Q9BXR3 956 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 ILKAPQ9H0C8 392 aaPredicted RBP9.73□□□□□ -0.85
SDF2-208ENST00000589788 SLAMF7Q9NQ25 335 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 PRDM7Q9NQW5 492 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 PRTFDC1Q9NRG1 225 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 MKS1Q9NXB0 559 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 FAM53CQ9NYF3 392 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 LUZP4Q9P127 313 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 PTGFRNQ9P2B2 879 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 TEKT2Q9UIF3 430 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 B3GNT3Q9Y2A9 372 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 MMACHCQ9Y4U1 282 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 SPACA6W5XKT8 324 aa9.73□□□□□ -0.85
SDF2-208ENST00000589788 DYTNA2CJ06 578 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 RTCAO00442 366 aaKnown RBP9.72□□□□□ -0.85
SDF2-208ENST00000589788 DLX3O60479 287 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 SUPT7LO94864 414 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 CELA2AP08217 269 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 MYL2P10916 166 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 ITGAMP11215 1152 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 NID1P14543 1247 aa9.72□□□□□ -0.85
SDF2-208ENST00000589788 ATF4P18848 351 aaPredicted RBP9.72□□□□□ -0.85
SDF2-208ENST00000589788 HIST1H1TP22492 207 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms