RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 MMP20O60882 483 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 SERPINB7O75635 380 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 POP7O75817 140 aaKnown RBP13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 MED26O95402 600 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 B3GALT4O96024 378 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 NUDT7P0C024 238 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 TFPTP0C1Z6 253 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 GPR89BP0CG08 455 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 HLA-EP13747 358 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 IDUAP35475 653 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 SOAT1P35610 550 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 MVDP53602 400 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 PCBP3P57721 371 aaKnown RBP13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 DEFA1P59665 94 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 DEFA3P59666 94 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 COPZ1P61923 177 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 EEF1A2Q05639 463 aaKnown RBP13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 LAPTM4AQ15012 233 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 DHCR24Q15392 516 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 NDUFA9Q16795 377 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 EXOC3L2Q2M3D2 409 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 COLEC12Q5KU26 742 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 AGAP7PQ5VUJ5 663 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 RAET1GQ6H3X3 334 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 PARS2Q7L3T8 475 aaKnown RBP13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 SLC46A3Q7Z3Q1 461 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 C17orf64Q86WR6 236 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 MFSD4AQ8N468 514 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 FAM46DQ8NEK8 389 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 TTLQ8NG68 377 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 ZNF675Q8TD23 568 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 CYB5D2Q8WUJ1 264 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 APH1BQ8WW43 257 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 GGHQ92820 318 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 DNASE1L2Q92874 299 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 NEURL3Q96EH8 262 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 PDXPQ96GD0 296 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 OR2AG1Q9H205 316 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 DSN1Q9H410 356 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 CRNNQ9UBG3 495 aaPredicted RBP13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 ACACBO00763 2458 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 TRBC2A0A5B9 178 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 LOC110117498-PIK3R3F6TDL0 507 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 FAAHO00519 579 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 CAPN5O15484 640 aaPredicted RBP13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 GUCY1B2O75343 617 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 NFATC1O95644 943 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 FUCA1P04066 466 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 KLK1P06870 262 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 ASGR2P07307 311 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 CTSLP07711 333 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 CISD3P0C7P0 127 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 DDCP20711 480 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 CBLP22681 906 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 PDHA2P29803 388 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 AQP1P29972 269 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 TGFBR2P37173 567 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 CCR2P41597 374 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 CRISP1P54107 249 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 PRKCDQ05655 676 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 CBX3Q13185 183 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 TSTA3Q13630 321 aaPredicted RBP13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 ELAVL3Q14576 367 aaKnown RBP13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 ZNF648Q5T619 568 aaPredicted RBP13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 DEPDC1Q5TB30 811 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 TMEM215Q68D42 235 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 PNCKQ6P2M8 343 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 SYCE2Q6PIF2 218 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 ADAMTSL4Q6UY14 1074 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 PLEKHG7Q6ZR37 379 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 ARMCX6Q7L4S7 300 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 SLC9B2Q86UD5 537 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 PDZD3Q86UT5 571 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 RNF130Q86XS8 419 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 LRRC56Q8IYG6 542 aaPredicted RBP13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 IL17RCQ8NAC3 791 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 OR4K1Q8NGD4 311 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 OR9Q1Q8NGQ5 310 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 CXorf40AQ8TE69 158 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 UTP15Q8TED0 518 aaKnown RBP13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 PIK3R3Q92569 461 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 MAL2Q969L2 176 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 ZBED6CLQ96FA7 236 aaPredicted RBP13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 SLIRPQ9GZT3 109 aaKnown RBP13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 NXF2Q9GZY0 626 aaKnown RBP13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 LINC00597Q9H2U6 94 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 ACSS1Q9NUB1 689 aaPredicted RBP13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 MKLN1Q9UL63 735 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 CFL2Q9Y281 166 aa13.39□□□□□ -0.27
NEDD4L-223ENST00000588516 PCM1Q15154 2024 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 METTL15A6NJ78 407 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 PDPK1O15530 556 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 LILRB5O75023 590 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 MOSPD3O75425 235 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 GCM2O75603 506 aaPredicted RBP13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 SNX4O95219 450 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 TGFB1P01137 390 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 DRD2P14416 443 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 ACADLP28330 430 aa13.38□□□□□ -0.27
NEDD4L-223ENST00000588516 PPP2R1BP30154 601 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms