RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 ZCCHC7Q8N3Z6 543 aaKnown RBP9.64□□□□□ -0.87
APOC1-201ENST00000586638 SLC25A45Q8N413 288 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 DTWD1Q8N5C7 304 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 CSNK1A1LQ8N752 337 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 ACOT4Q8N9L9 421 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 FAM47BQ8NA70 645 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 CAMKVQ8NCB2 501 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 UTP15Q8TED0 518 aaKnown RBP9.64□□□□□ -0.87
APOC1-201ENST00000586638 RERGQ96A58 199 aaPredicted RBP9.64□□□□□ -0.87
APOC1-201ENST00000586638 ZUFSPQ96AP4 578 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 TM4SF19Q96DZ7 209 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 MTERF3Q96E29 417 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 FAM120BQ96EK7 910 aaKnown RBP9.64□□□□□ -0.87
APOC1-201ENST00000586638 ZNF583Q96ND8 569 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 TGM7Q96PF1 710 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 MAPKAP1Q9BPZ7 522 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 ECSITQ9BQ95 431 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 CCDC3Q9BQI4 270 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 TACO1Q9BSH4 297 aaKnown RBP9.64□□□□□ -0.87
APOC1-201ENST00000586638 MUC13Q9H3R2 512 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 FAM60AQ9NP50 221 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 SLAMF7Q9NQ25 335 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 PRDM7Q9NQW5 492 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 STARD5Q9NSY2 213 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 VPS4AQ9UN37 437 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 ERVK-11Q9UQG0 969 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 PCDHB3Q9Y5E6 796 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 CSNK1G3Q9Y6M4 447 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 V9GYQ6 96 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 SCN2AQ99250 2005 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 LAMA5O15230 3695 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 A0A1B0GTQ1 180 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 TBX19O60806 448 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 SCELO95171 688 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 GGT1P19440 569 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 ALDH4A1P30038 563 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 MLLT3P42568 568 aaPredicted RBP9.63□□□□□ -0.87
APOC1-201ENST00000586638 GSTM5P46439 218 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 RXRGP48443 463 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 PTDSS1P48651 473 aaKnown RBP9.63□□□□□ -0.87
APOC1-201ENST00000586638 ARRB1P49407 418 aaPredicted RBP9.63□□□□□ -0.87
APOC1-201ENST00000586638 GZMMP51124 257 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 EPHA4P54764 986 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 HBA1P69905 142 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 OLR1P78380 273 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 SLAMF1Q13291 335 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 SLC9A5Q14940 896 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 HEPACAMQ14CZ8 416 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 C18orf63Q68DL7 685 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 PRSS41Q7RTY9 318 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 KANSL1Q7Z3B3 1105 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 CALHM3Q86XJ0 350 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 MARCH9Q86YJ5 346 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 MICU2Q8IYU8 434 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 SRFBP1Q8NEF9 429 aaKnown RBP9.63□□□□□ -0.87
APOC1-201ENST00000586638 VPS37AQ8NEZ2 397 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 OR2T12Q8NG77 320 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 OR5AK3PQ8NH89 298 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 NRG4Q8WWG1 115 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 KLHL6Q8WZ60 621 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 FIG4Q92562 907 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 CCDC74AQ96AQ1 378 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 SLCO4A1Q96BD0 722 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 BBC3Q96PG8 261 aaPredicted RBP9.63□□□□□ -0.87
APOC1-201ENST00000586638 SH3GL1Q99961 368 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 SLC35A5Q9BS91 424 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 FAIM2Q9BWQ8 316 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 TRIM4Q9C037 500 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 RPF2Q9H7B2 306 aaKnown RBP9.63□□□□□ -0.87
APOC1-201ENST00000586638 KAT8Q9H7Z6 458 aaKnown RBP9.63□□□□□ -0.87
APOC1-201ENST00000586638 LYARQ9NX58 379 aaKnown RBP9.63□□□□□ -0.87
APOC1-201ENST00000586638 TOR4AQ9NXH8 423 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 ACTR3BQ9P1U1 418 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 LRIT1Q9P2V4 623 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 ZNF282Q9UDV7 671 aaPredicted RBP9.63□□□□□ -0.87
APOC1-201ENST00000586638 KLHL3Q9UH77 587 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 MAGEL2Q9UJ55 1249 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 ATG4BQ9Y4P1 393 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 ASB4Q9Y574 426 aa9.63□□□□□ -0.87
APOC1-201ENST00000586638 ARID1BQ8NFD5 2236 aaPredicted RBP9.63□□□□□ -0.87
APOC1-201ENST00000586638 IGHV1OR21-1A0A087WYE8 117 aa9.62□□□□□ -0.87
APOC1-201ENST00000586638 A0A1W2PR48 441 aa9.62□□□□□ -0.87
APOC1-201ENST00000586638 A0A1W2PRB8 838 aa9.62□□□□□ -0.87
APOC1-201ENST00000586638 A0A1W2PS29 197 aa9.62□□□□□ -0.87
APOC1-201ENST00000586638 TCRBV5S2A0A599 114 aa9.62□□□□□ -0.87
APOC1-201ENST00000586638 ELOVL7A1L3X0 281 aa9.62□□□□□ -0.87
APOC1-201ENST00000586638 TLCD2A6NGC4 264 aa9.62□□□□□ -0.87
APOC1-201ENST00000586638 GLOD5A6NK44 160 aa9.62□□□□□ -0.87
APOC1-201ENST00000586638 AQP12BA6NM10 295 aa9.62□□□□□ -0.87
APOC1-201ENST00000586638 CLIC1O00299 241 aa9.62□□□□□ -0.87
APOC1-201ENST00000586638 GSTA4O15217 222 aa9.62□□□□□ -0.87
APOC1-201ENST00000586638 CASC3O15234 703 aaKnown RBP9.62□□□□□ -0.87
APOC1-201ENST00000586638 DKK1O94907 266 aa9.62□□□□□ -0.87
APOC1-201ENST00000586638 ZCCHC18P0CG32 403 aa9.62□□□□□ -0.87
APOC1-201ENST00000586638 SMIM10L1P0DMW3 83 aa9.62□□□□□ -0.87
APOC1-201ENST00000586638 NR2F6P10588 404 aa9.62□□□□□ -0.87
APOC1-201ENST00000586638 CSF2RBP32927 897 aa9.62□□□□□ -0.87
APOC1-201ENST00000586638 PTGER1P34995 402 aa9.62□□□□□ -0.87
APOC1-201ENST00000586638 CDK9P50750 372 aaKnown RBP9.62□□□□□ -0.87
APOC1-201ENST00000586638 ARFIP1P53367 373 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms