RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 SFT2D3Q587I9 215 aa19.36■□□□□ 0.69
ATG4D-204ENST00000586417 CMPK2Q5EBM0 449 aa19.36■□□□□ 0.69
ATG4D-204ENST00000586417 PERM1Q5SV97 790 aa19.36■□□□□ 0.69
ATG4D-204ENST00000586417 NDUFAF5Q5TEU4 345 aa19.36■□□□□ 0.69
ATG4D-204ENST00000586417 CPZQ66K79 652 aa19.36■□□□□ 0.69
ATG4D-204ENST00000586417 FRMPD2BQ6IN97 320 aa19.36■□□□□ 0.69
ATG4D-204ENST00000586417 FAM180BQ6P0A1 224 aa19.36■□□□□ 0.69
ATG4D-204ENST00000586417 PTOV1Q86YD1 416 aa19.36■□□□□ 0.69
ATG4D-204ENST00000586417 ZZZ3Q8IYH5 903 aa19.36■□□□□ 0.69
ATG4D-204ENST00000586417 Q8N9G6 341 aaPredicted RBP19.36■□□□□ 0.69
ATG4D-204ENST00000586417 RHBDD1Q8TEB9 315 aa19.36■□□□□ 0.69
ATG4D-204ENST00000586417 CCDC74AQ96AQ1 378 aa19.36■□□□□ 0.69
ATG4D-204ENST00000586417 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.36■□□□□ 0.69
ATG4D-204ENST00000586417 GPATCH2Q9NW75 528 aa19.36■□□□□ 0.69
ATG4D-204ENST00000586417 TAS2R7Q9NYW3 318 aa19.36■□□□□ 0.69
ATG4D-204ENST00000586417 C5AR2Q9P296 337 aa19.36■□□□□ 0.69
ATG4D-204ENST00000586417 PCDHGB4Q9UN71 923 aa19.36■□□□□ 0.69
ATG4D-204ENST00000586417 FLRT2O43155 660 aa19.35■□□□□ 0.69
ATG4D-204ENST00000586417 HNRNPRO43390 633 aaKnown RBP19.35■□□□□ 0.69
ATG4D-204ENST00000586417 B4GAT1O43505 415 aa19.35■□□□□ 0.69
ATG4D-204ENST00000586417 SLC35G6P0C7Q6 338 aa19.35■□□□□ 0.69
ATG4D-204ENST00000586417 SMIM10L1P0DMW3 83 aa19.35■□□□□ 0.69
ATG4D-204ENST00000586417 PCBP4P57723 403 aaKnown RBP19.35■□□□□ 0.69
ATG4D-204ENST00000586417 PDSS2Q86YH6 399 aa19.35■□□□□ 0.69
ATG4D-204ENST00000586417 NATD1Q8N6N6 113 aa19.35■□□□□ 0.69
ATG4D-204ENST00000586417 ADCY4Q8NFM4 1077 aa19.35■□□□□ 0.69
ATG4D-204ENST00000586417 UTP15Q8TED0 518 aaKnown RBP19.35■□□□□ 0.69
ATG4D-204ENST00000586417 SMIM10Q96HG1 83 aa19.35■□□□□ 0.69
ATG4D-204ENST00000586417 ATG4BQ9Y4P1 393 aa19.35■□□□□ 0.69
ATG4D-204ENST00000586417 LOC105369274A0A096LPK9 316 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 LOC102723532A0A0G2JNH3 316 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 EME2A4GXA9 379 aaPredicted RBP19.34■□□□□ 0.69
ATG4D-204ENST00000586417 PDPK1O15530 556 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 GMNNO75496 209 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 CREG1O75629 220 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 ZNF888P0CJ79 500 aaPredicted RBP19.34■□□□□ 0.69
ATG4D-204ENST00000586417 CKMT1AP12532 417 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 ACADSP16219 412 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 RGNQ15493 299 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 VMACQ2NL98 169 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 GRAMD1BQ3KR37 738 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 AMIGO2Q86SJ2 522 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 OR4N4Q8N0Y3 316 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 SLC35A5Q9BS91 424 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 SEMA6AQ9H2E6 1030 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 AGPAT4Q9NRZ5 378 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 EHD3Q9NZN3 535 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 CORO2BQ9UQ03 480 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 A0A1W2PR48 441 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 PRKRAO75569 313 aaKnown RBP19.34■□□□□ 0.69
ATG4D-204ENST00000586417 DDX5P17844 614 aaKnown RBP19.34■□□□□ 0.69
ATG4D-204ENST00000586417 ATP6V1C1P21283 382 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 TGM3Q08188 693 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 NR1D2Q14995 579 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 C16orf72Q14CZ0 275 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 ARMC6Q6NXE6 501 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 TRIML2Q8N7C3 387 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 FAM86B1Q8N7N1 296 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 NETO1Q8TDF5 533 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 OR5P2Q8WZ92 322 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 EXOSC8Q96B26 276 aaKnown RBP19.34■□□□□ 0.69
ATG4D-204ENST00000586417 DPH2Q9BQC3 489 aaPredicted RBP19.34■□□□□ 0.69
ATG4D-204ENST00000586417 FAIM2Q9BWQ8 316 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 SPATA9Q9BWV2 254 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 SEMA6CQ9H3T2 930 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 CXorf36Q9H7Y0 433 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 ACSL6Q9UKU0 697 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 DTNAQ9Y4J8 743 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 V9GYQ6 96 aa19.34■□□□□ 0.69
ATG4D-204ENST00000586417 CFAP54Q96N23 3096 aa19.33■□□□□ 0.69
ATG4D-204ENST00000586417 IGHV1OR21-1A0A087WYE8 117 aa19.33■□□□□ 0.68
ATG4D-204ENST00000586417 H0YGG7 62 aa19.33■□□□□ 0.68
ATG4D-204ENST00000586417 NTRK1P04629 796 aa19.33■□□□□ 0.68
ATG4D-204ENST00000586417 PROS1P07225 676 aa19.33■□□□□ 0.68
ATG4D-204ENST00000586417 NUDT7P0C024 238 aa19.33■□□□□ 0.68
ATG4D-204ENST00000586417 ST6GAL1P15907 406 aa19.33■□□□□ 0.68
ATG4D-204ENST00000586417 CAPZBP47756 277 aa19.33■□□□□ 0.68
ATG4D-204ENST00000586417 ARF3P61204 181 aaPredicted RBP19.33■□□□□ 0.68
ATG4D-204ENST00000586417 BTN3A2P78410 334 aa19.33■□□□□ 0.68
ATG4D-204ENST00000586417 DAB2P98082 770 aa19.33■□□□□ 0.68
ATG4D-204ENST00000586417 MAP7Q14244 749 aa19.33■□□□□ 0.68
ATG4D-204ENST00000586417 AMZ1Q400G9 498 aa19.33■□□□□ 0.68
ATG4D-204ENST00000586417 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.33■□□□□ 0.68
ATG4D-204ENST00000586417 ERICH5Q6P6B1 374 aa19.33■□□□□ 0.68
ATG4D-204ENST00000586417 KLHL35Q6PF15 583 aa19.33■□□□□ 0.68
ATG4D-204ENST00000586417 NAXDQ8IW45 347 aa19.33■□□□□ 0.68
ATG4D-204ENST00000586417 FAM162AQ96A26 154 aa19.33■□□□□ 0.68
ATG4D-204ENST00000586417 NAF1Q96HR8 494 aaKnown RBP19.33■□□□□ 0.68
ATG4D-204ENST00000586417 CNDP2Q96KP4 475 aaKnown RBP19.33■□□□□ 0.68
ATG4D-204ENST00000586417 SEPHS2Q99611 448 aa19.33■□□□□ 0.68
ATG4D-204ENST00000586417 EPS8L2Q9H6S3 715 aa19.33■□□□□ 0.68
ATG4D-204ENST00000586417 DCAF13Q9NV06 445 aaKnown RBP19.33■□□□□ 0.68
ATG4D-204ENST00000586417 COL5A1P20908 1838 aaPredicted RBP19.33■□□□□ 0.68
ATG4D-204ENST00000586417 WASHC1A8K0Z3 465 aa19.32■□□□□ 0.68
ATG4D-204ENST00000586417 TPST1O60507 370 aa19.32■□□□□ 0.68
ATG4D-204ENST00000586417 LDOC1O95751 146 aaPredicted RBP19.32■□□□□ 0.68
ATG4D-204ENST00000586417 AIFM1O95831 613 aa19.32■□□□□ 0.68
ATG4D-204ENST00000586417 BMP2P12643 396 aa19.32■□□□□ 0.68
ATG4D-204ENST00000586417 GPR3P46089 330 aa19.32■□□□□ 0.68
ATG4D-204ENST00000586417 AQP4P55087 323 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms