RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 C6orf47O95873 294 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 IFNA14P01570 189 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 C9P02748 559 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 GSNP06396 782 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 GPIP06744 558 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 HBQ1P09105 142 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 ANKRD34CP0C6C1 535 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 UMPSP11172 480 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 LAMP1P11279 417 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 RNH1P13489 461 aaKnown RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 CRATP43155 626 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 ZFP36L2P47974 494 aaKnown RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 GSK3BP49841 420 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 SEPHS1P49903 392 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 KHKP50053 298 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 NCBP2P52298 156 aaKnown RBP eCLIP5.86□□□□□ -1.47
LIG3-206ENST00000586058 ITGA1P56199 1179 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 POLE2P56282 527 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 RAB38P57729 211 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 PPP1CAP62136 330 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 MRPS22P82650 360 aaKnown RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 SHC2P98077 582 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 VAC14Q08AM6 782 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 STX4Q12846 297 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 CEACAM7Q14002 265 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 FAM53BQ14153 422 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 MLC1Q15049 377 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 FAM98BQ52LJ0 330 aaKnown RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 RUNDC3AQ59EK9 446 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 RABL3Q5HYI8 236 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 PHF19Q5T6S3 580 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 MFSD4BQ5TF39 518 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 NKAIN2Q5VXU1 208 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 FRMPD2BQ6IN97 320 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 TMEM214Q6NUQ4 689 aaKnown RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 SLC48A1Q6P1K1 146 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 C8orf82Q6P1X6 216 aaPredicted RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 GUSBP11Q6P575 273 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 PGM2L1Q6PCE3 622 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 VN1R4Q7Z5H5 301 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 SERPINA11Q86U17 422 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 SFTPA2Q8IWL1 248 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 AQP12AQ8IXF9 295 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 SLC15A3Q8IY34 581 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 MICU2Q8IYU8 434 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 CLECL1Q8IZS7 167 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 LRRC25Q8N386 305 aaPredicted RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 FAM47BQ8NA70 645 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 GOLM1Q8NBJ4 401 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 CATSPER1Q8NEC5 780 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 OR4K14Q8NGD5 310 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 OR4D9Q8NGE8 314 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 OR56A1Q8NGH5 318 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 OR10A6Q8NH74 314 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 SFXN5Q8TD22 340 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 FIG4Q92562 907 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 SDCCAG3Q96C92 435 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 TM4SF18Q96CE8 201 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 TM4SF19Q96DZ7 209 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 MMABQ96EY8 250 aaPredicted RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 REXO5Q96IC2 774 aaKnown RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 SLC45A3Q96JT2 553 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 CNDP2Q96KP4 475 aaKnown RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 RNF145Q96MT1 663 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 FCRL4Q96PJ5 515 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 TEFMQ96QE5 360 aaKnown RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 CPPED1Q9BRF8 314 aaPredicted RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 GPATCH1Q9BRR8 931 aaKnown RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 PELOQ9BRX2 385 aaKnown RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 UGT2B28Q9BY64 529 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 TWSG1Q9GZX9 223 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 PAIP1Q9H074 479 aaKnown RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 LRRN3Q9H3W5 708 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 KLHL31Q9H511 634 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 ZNF768Q9H5H4 540 aaKnown RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 RPF2Q9H7B2 306 aaKnown RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 TPT1P8Q9HAU6 139 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 SLC35C2Q9NQQ7 365 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 PRDM7Q9NQW5 492 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 ADPRHL2Q9NX46 363 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 TEX10Q9NXF1 929 aaPredicted RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 VAPAQ9P0L0 249 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 ACTR3BQ9P1U1 418 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 MAP10Q9P2G4 905 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 EGFL7Q9UHF1 273 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 RPS6KA6Q9UK32 745 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 PACSIN3Q9UKS6 424 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 BAG5Q9UL15 447 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 DAPP1Q9UN19 280 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 FAF1Q9UNN5 650 aaPredicted RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 SAMD4AQ9UPU9 718 aaKnown RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 PCDHB14Q9Y5E9 798 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 PCDHA9Q9Y5H5 950 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 RP1P56715 2156 aa5.85□□□□□ -1.47
LIG3-206ENST00000586058 LOC105369274A0A096LPK9 316 aa5.85□□□□□ -1.47
LIG3-206ENST00000586058 LOC102723532A0A0G2JNH3 316 aa5.85□□□□□ -1.47
LIG3-206ENST00000586058 DHRS12A0PJE2 317 aa5.85□□□□□ -1.47
LIG3-206ENST00000586058 HYKKA2RU49 373 aa5.85□□□□□ -1.47
LIG3-206ENST00000586058 FAM86C2PA6NEL3 165 aa5.85□□□□□ -1.47
LIG3-206ENST00000586058 ZNF860A6NHJ4 632 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms