RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 TAS2R7Q9NYW3 318 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 FOXJ2Q9P0K8 574 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 ABCD2Q9UBJ2 740 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 SUCOQ9UBS9 1254 aaKnown RBP11.97□□□□□ -0.49
VMP1-202ENST00000585847 DKK4Q9UBT3 224 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 PCDHGA3Q9Y5H0 932 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 SCN3AQ9NY46 2000 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 A0A096LPI6 279 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 PRSS51A0A1B0GVH4 220 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 C4orf51C9J302 202 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 DXOO77932 396 aaKnown RBP11.96□□□□□ -0.49
VMP1-202ENST00000585847 TNFSF15O95150 251 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 IFI6P09912 130 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 JMJD7P0C870 316 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 BSGP35613 385 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 CPA2P48052 419 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 VSX2P58304 361 aaPredicted RBP11.96□□□□□ -0.49
VMP1-202ENST00000585847 NFYCQ13952 458 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 IL11RAQ14626 422 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 HKDC1Q2TB90 917 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 LRIF1Q5T3J3 769 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 FAM71E1Q6IPT2 247 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 PWWP2BQ6NUJ5 590 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 ABHD17CQ6PCB6 329 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 PGM2L1Q6PCE3 622 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 RINLQ6ZS11 566 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 ULK2Q8IYT8 1036 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 FBXW8Q8N3Y1 598 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 RNF175Q8N4F7 328 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 SLC38A9Q8NBW4 561 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 PPCDCQ96CD2 204 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 LRRC58Q96CX6 371 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 MS4A6EQ96DS6 147 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 C10orf90Q96M02 699 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 CCDC115Q96NT0 180 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 DCBLD2Q96PD2 775 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 SERINC2Q96SA4 455 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 DDA1Q9BW61 102 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 TRIM15Q9C019 465 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 RAD21L1Q9H4I0 556 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 RARRES3Q9UL19 164 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 PSME2Q9UL46 239 aa11.96□□□□□ -0.49
VMP1-202ENST00000585847 CCDC88CQ9P219 2028 aa11.96□□□□□ -0.5
VMP1-202ENST00000585847 APC2O95996 2303 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 A0A0A6YYD5 115 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 C1orf226A1L170 272 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 FBP2O00757 339 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 POLR1CO15160 346 aaPredicted RBP11.95□□□□□ -0.5
VMP1-202ENST00000585847 ERI3O43414 337 aaKnown RBP11.95□□□□□ -0.5
VMP1-202ENST00000585847 BRINP1O60477 761 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 SLITRK5O94991 958 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 SMIM10L1P0DMW3 83 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 TPP2P29144 1249 aaPredicted RBP11.95□□□□□ -0.5
VMP1-202ENST00000585847 ZFP36L2P47974 494 aaKnown RBP11.95□□□□□ -0.5
VMP1-202ENST00000585847 ITGA1P56199 1179 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 EEFSECP57772 596 aaKnown RBP11.95□□□□□ -0.5
VMP1-202ENST00000585847 KCNJ2P63252 427 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 RAE1P78406 368 aaKnown RBP11.95□□□□□ -0.5
VMP1-202ENST00000585847 SLC25A3Q00325 362 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 TRAP1Q12931 704 aaKnown RBP11.95□□□□□ -0.5
VMP1-202ENST00000585847 MLC1Q15049 377 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 TLR1Q15399 786 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.95□□□□□ -0.5
VMP1-202ENST00000585847 SPANXN4Q5MJ08 99 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 ZNF385CQ66K41 422 aaPredicted RBP11.95□□□□□ -0.5
VMP1-202ENST00000585847 TIPARPQ7Z3E1 657 aaKnown RBP11.95□□□□□ -0.5
VMP1-202ENST00000585847 PPP1R3BQ86XI6 285 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 SHISA5Q8N114 240 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 KIF2BQ8N4N8 673 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 CSNK1A1LQ8N752 337 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 OR8K5Q8NH50 307 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 ZFP28Q8NHY6 868 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 C16orf78Q8WTQ4 265 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 GTF2H4Q92759 462 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 ASB9Q96DX5 294 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 MVB12AQ96EY5 273 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 SMIM10Q96HG1 83 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 GBP5Q96PP8 586 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 OR52E6Q96RD3 313 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 THTPAQ9BU02 230 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 DUSP26Q9BV47 211 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 ZNF717Q9BY31 904 aaPredicted RBP11.95□□□□□ -0.5
VMP1-202ENST00000585847 B3GNT4Q9C0J1 378 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 FANCEQ9HB96 536 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 LYRM4Q9HD34 91 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 ACSS1Q9NUB1 689 aaPredicted RBP11.95□□□□□ -0.5
VMP1-202ENST00000585847 GIMAP4Q9NUV9 329 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 AKAP7Q9P0M2 348 aaPredicted RBP11.95□□□□□ -0.5
VMP1-202ENST00000585847 ZNF282Q9UDV7 671 aaPredicted RBP11.95□□□□□ -0.5
VMP1-202ENST00000585847 PCDHGB4Q9UN71 923 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 MRPS2Q9Y399 296 aaKnown RBP11.95□□□□□ -0.5
VMP1-202ENST00000585847 L3MBTL1Q9Y468 752 aa11.95□□□□□ -0.5
VMP1-202ENST00000585847 SETXQ7Z333 2677 aaKnown RBP11.94□□□□□ -0.5
VMP1-202ENST00000585847 FXYD1O00168 92 aa11.94□□□□□ -0.5
VMP1-202ENST00000585847 NVLO15381 856 aaKnown RBP11.94□□□□□ -0.5
VMP1-202ENST00000585847 ZNF749O43361 778 aa11.94□□□□□ -0.5
VMP1-202ENST00000585847 B3GALT2O43825 422 aa11.94□□□□□ -0.5
VMP1-202ENST00000585847 OR2B3O76000 313 aa11.94□□□□□ -0.5
VMP1-202ENST00000585847 DLGAP3O95886 979 aa11.94□□□□□ -0.5
VMP1-202ENST00000585847 KLK1P06870 262 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms