RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 OR1G1P47890 313 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 DUSP3P51452 185 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 BPIFB3P59826 476 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 PLOD1Q02809 727 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 FOLH1Q04609 750 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 UBE2V1Q13404 147 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 DAZAP2Q15038 168 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 SOWAHAQ2M3V2 549 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 EIF2S3LQ2VIR3 472 aaKnown RBP1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 ITPRIPL2Q3MIP1 535 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 CDONQ4KMG0 1287 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 CXorf66Q5JRM2 361 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 LDLRAP1Q5SW96 308 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 PM20D1Q6GTS8 502 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 MFSD12Q6NUT3 480 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 IRGCQ6NXR0 463 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 WDR73Q6P4I2 378 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 KDELC1Q6UW63 502 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 SUSD1Q6UWL2 747 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 MFSD7Q6UXD7 560 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 Q6ZTK2 550 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 DPPA4Q7L190 304 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM126BQ8IUX1 230 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 SPEM1Q8N4L4 309 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 PAQR4Q8N4S7 273 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC5A8Q8N695 610 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 CSGALNACT2Q8N6G5 542 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 NAT8LQ8N9F0 302 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 BBOF1Q8ND07 529 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 SEMA4DQ92854 862 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 MR1Q95460 341 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 CLDN23Q96B33 292 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM18Q96B42 140 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 ZBTB9Q96C00 473 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 ULK4Q96C45 1275 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 CTHRC1Q96CG8 243 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 RPGRIP1Q96KN7 1286 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 SENP8Q96LD8 212 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 TTC25Q96NG3 672 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 DACH2Q96NX9 599 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 MACROD1Q9BQ69 325 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 C1QTNF5Q9BXJ0 243 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 DUSP16Q9BY84 665 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 SEMA6AQ9H2E6 1030 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 LRMDAQ9H2I8 198 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 LRRC4Q9HBW1 653 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 SGK2Q9HBY8 427 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 MOV10Q9HCE1 1003 aaKnown RBP1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 PNRC2Q9NPJ4 139 aaKnown RBP1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 SERINC1Q9NRX5 453 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 C5AR2Q9P296 337 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF624Q9P2J8 865 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 C19orf25Q9UFG5 118 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 RNF150Q9ULK6 438 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 PLA2G4CQ9UP65 541 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 LIPT1Q9Y234 373 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 INSL5Q9Y5Q6 135 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 KIAA1549LQ6ZVL6 1849 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 A0A0A0MQY5 61 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ERI2A8K979 691 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 E2F3O00716 465 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CHMP2AO43633 222 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PLRG1O43660 514 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 JAK2O60674 1132 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SEC22BO75396 215 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 WBP4O75554 376 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SERPINI2O75830 405 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 BCAS2O75934 225 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 IGLV3-19P01714 112 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 KLKB1P03952 638 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ALPPP05187 535 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ALPPL2P10696 532 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 HOXB2P14652 356 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 AREGP15514 252 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TNNI3P19429 210 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PKLRP30613 574 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PCK1P35558 622 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ATP5C1P36542 298 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 MTIF2P46199 727 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC11A1P49279 550 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 FMO5P49326 533 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 HSD17B7P56937 341 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 KIAA1024LP59773 190 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SEC61A1P61619 476 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC18A2Q05940 514 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 FCHO2Q0JRZ9 810 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CUL2Q13617 745 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 EXOC3L4Q17RC7 722 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ACCSLQ4AC99 568 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 KLHL26Q53HC5 615 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 BOLA3Q53S33 107 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SGO1Q5FBB7 561 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 FSCBQ5H9T9 825 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 KCNT1Q5JUK3 1230 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 OTUD3Q5T2D3 398 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 LYPLAL1Q5VWZ2 237 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 RUSC1-AS1Q66K80 236 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 AWAT2Q6E213 333 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TMPRSS11FQ6ZWK6 438 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 NLRP9Q7RTR0 991 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms