RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 TNFRSF17Q02223 184 aa23.22■■□□□ 1.31
TTC39C-209ENST00000584250 ZNF844Q08AG5 666 aa23.22■■□□□ 1.31
TTC39C-209ENST00000584250 LCP2Q13094 533 aa23.22■■□□□ 1.31
TTC39C-209ENST00000584250 RCN2Q14257 317 aa23.22■■□□□ 1.31
TTC39C-209ENST00000584250 PCLAFQ15004 111 aa23.22■■□□□ 1.31
TTC39C-209ENST00000584250 ACER2Q5QJU3 275 aa23.22■■□□□ 1.31
TTC39C-209ENST00000584250 SCIMPQ6UWF3 145 aa23.22■■□□□ 1.31
TTC39C-209ENST00000584250 C10orf107Q8IVU9 208 aa23.22■■□□□ 1.31
TTC39C-209ENST00000584250 MYRIPQ8NFW9 859 aa23.22■■□□□ 1.31
TTC39C-209ENST00000584250 DOK4Q8TEW6 326 aa23.22■■□□□ 1.31
TTC39C-209ENST00000584250 AGAP11Q8TF27 550 aa23.22■■□□□ 1.31
TTC39C-209ENST00000584250 TMEM109Q9BVC6 243 aa23.22■■□□□ 1.31
TTC39C-209ENST00000584250 SHCBP1LQ9BZQ2 653 aa23.22■■□□□ 1.31
TTC39C-209ENST00000584250 OXSMQ9NWU1 459 aa23.22■■□□□ 1.31
TTC39C-209ENST00000584250 TEX10Q9NXF1 929 aaPredicted RBP23.22■■□□□ 1.31
TTC39C-209ENST00000584250 SNX6Q9UNH7 406 aa23.22■■□□□ 1.31
TTC39C-209ENST00000584250 PLLPQ9Y342 182 aa23.22■■□□□ 1.31
TTC39C-209ENST00000584250 A0A1W2PS29 197 aa23.21■■□□□ 1.31
TTC39C-209ENST00000584250 IFNA16P05015 189 aa23.21■■□□□ 1.31
TTC39C-209ENST00000584250 KLK1P06870 262 aa23.21■■□□□ 1.31
TTC39C-209ENST00000584250 TNFSF10P50591 281 aa23.21■■□□□ 1.31
TTC39C-209ENST00000584250 GALNT1Q10472 559 aaPredicted RBP23.21■■□□□ 1.31
TTC39C-209ENST00000584250 TBL3Q12788 808 aaKnown RBP23.21■■□□□ 1.31
TTC39C-209ENST00000584250 ZNF169Q14929 603 aaPredicted RBP23.21■■□□□ 1.31
TTC39C-209ENST00000584250 DGAT2L6Q6ZPD8 337 aa23.21■■□□□ 1.31
TTC39C-209ENST00000584250 NUDT13Q86X67 352 aa23.21■■□□□ 1.31
TTC39C-209ENST00000584250 METTL4Q8N3J2 472 aa23.21■■□□□ 1.31
TTC39C-209ENST00000584250 ZNF321PQ8N8H1 164 aa23.21■■□□□ 1.31
TTC39C-209ENST00000584250 OR1N1Q8NGS0 311 aa23.21■■□□□ 1.31
TTC39C-209ENST00000584250 METTL6Q8TCB7 284 aa23.21■■□□□ 1.31
TTC39C-209ENST00000584250 PTPMT1Q8WUK0 201 aaPredicted RBP23.21■■□□□ 1.31
TTC39C-209ENST00000584250 HAS2Q92819 552 aa23.21■■□□□ 1.31
TTC39C-209ENST00000584250 CDCP1Q9H5V8 836 aa23.21■■□□□ 1.31
TTC39C-209ENST00000584250 RPF2Q9H7B2 306 aaKnown RBP23.21■■□□□ 1.31
TTC39C-209ENST00000584250 MID1IP1Q9NPA3 183 aa23.21■■□□□ 1.31
TTC39C-209ENST00000584250 ADAP2Q9NPF8 381 aa23.21■■□□□ 1.31
TTC39C-209ENST00000584250 ASF1BQ9NVP2 202 aa23.21■■□□□ 1.31
TTC39C-209ENST00000584250 MKS1Q9NXB0 559 aa23.21■■□□□ 1.31
TTC39C-209ENST00000584250 ANKRD10Q9NXR5 420 aa23.21■■□□□ 1.31
TTC39C-209ENST00000584250 PRKNO60260 465 aaPredicted RBP23.2■■□□□ 1.3
TTC39C-209ENST00000584250 MLYCDO95822 493 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 AIFM1O95831 613 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 DNAJB13P59910 316 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 AP2B1P63010 937 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 STX4Q12846 297 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 ZNF468Q5VIY5 522 aaPredicted RBP23.2■■□□□ 1.3
TTC39C-209ENST00000584250 CYP20A1Q6UW02 462 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 FRMD7Q6ZUT3 714 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 COMMD6Q7Z4G1 85 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 IQCKQ8N0W5 287 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 B3GNT7Q8NFL0 401 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 RDH11Q8TC12 318 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 THAP3Q8WTV1 239 aaPredicted RBP23.2■■□□□ 1.3
TTC39C-209ENST00000584250 NCLNQ969V3 563 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 CCDC126Q96EE4 140 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 FAM111AQ96PZ2 611 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 SLC29A3Q9BZD2 475 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 MAP10Q9P2G4 905 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 VTI1BQ9UEU0 232 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 PHF11Q9UIL8 331 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 SPACA6W5XKT8 324 aa23.2■■□□□ 1.3
TTC39C-209ENST00000584250 PRRC2CQ9Y520 2896 aaKnown RBP23.19■■□□□ 1.3
TTC39C-209ENST00000584250 TRBV11-1A0A0K0K1C0 115 aa23.19■■□□□ 1.3
TTC39C-209ENST00000584250 DYTNA2CJ06 578 aa23.19■■□□□ 1.3
TTC39C-209ENST00000584250 ESRRBO95718 433 aa23.19■■□□□ 1.3
TTC39C-209ENST00000584250 HMOX2P30519 316 aa23.19■■□□□ 1.3
TTC39C-209ENST00000584250 PKNOX1P55347 436 aa23.19■■□□□ 1.3
TTC39C-209ENST00000584250 IGLV3-21P80748 117 aaPredicted RBP23.19■■□□□ 1.3
TTC39C-209ENST00000584250 FOLH1Q04609 750 aa23.19■■□□□ 1.3
TTC39C-209ENST00000584250 SRSF11Q05519 484 aaKnown RBP23.19■■□□□ 1.3
TTC39C-209ENST00000584250 TLR1Q15399 786 aa23.19■■□□□ 1.3
TTC39C-209ENST00000584250 ELAVL1Q15717 326 aaKnown RBP23.19■■□□□ 1.3
TTC39C-209ENST00000584250 KRT71Q3SY84 523 aa23.19■■□□□ 1.3
TTC39C-209ENST00000584250 C10orf62Q5T681 223 aaPredicted RBP23.19■■□□□ 1.3
TTC39C-209ENST00000584250 MMP21Q8N119 569 aa23.19■■□□□ 1.3
TTC39C-209ENST00000584250 PPWD1Q96BP3 646 aaKnown RBP23.19■■□□□ 1.3
TTC39C-209ENST00000584250 ZNF354BQ96LW1 612 aa23.19■■□□□ 1.3
TTC39C-209ENST00000584250 MECRQ9BV79 373 aa23.19■■□□□ 1.3
TTC39C-209ENST00000584250 GATA5Q9BWX5 397 aaPredicted RBP23.19■■□□□ 1.3
TTC39C-209ENST00000584250 ACPTQ9BZG2 426 aa23.19■■□□□ 1.3
TTC39C-209ENST00000584250 BRF2Q9HAW0 419 aa23.19■■□□□ 1.3
TTC39C-209ENST00000584250 LYARQ9NX58 379 aaKnown RBP23.19■■□□□ 1.3
TTC39C-209ENST00000584250 PPIEQ9UNP9 301 aaKnown RBP23.19■■□□□ 1.3
TTC39C-209ENST00000584250 PGRMC2O15173 223 aa23.18■■□□□ 1.3
TTC39C-209ENST00000584250 KRT6AP02538 564 aa23.18■■□□□ 1.3
TTC39C-209ENST00000584250 KRT6BP04259 564 aa23.18■■□□□ 1.3
TTC39C-209ENST00000584250 SERPINB3P29508 390 aa23.18■■□□□ 1.3
TTC39C-209ENST00000584250 UQCRFS1P47985 274 aa23.18■■□□□ 1.3
TTC39C-209ENST00000584250 KRT6CP48668 564 aa23.18■■□□□ 1.3
TTC39C-209ENST00000584250 HMGCS1Q01581 520 aa23.18■■□□□ 1.3
TTC39C-209ENST00000584250 TERF2Q15554 542 aa23.18■■□□□ 1.3
TTC39C-209ENST00000584250 C16orf47Q6ZP98 133 aaPredicted RBP23.18■■□□□ 1.3
TTC39C-209ENST00000584250 RPS19BP1Q86WX3 136 aaKnown RBP23.18■■□□□ 1.3
TTC39C-209ENST00000584250 C1orf52Q8N6N3 182 aaKnown RBP23.18■■□□□ 1.3
TTC39C-209ENST00000584250 TCP10LQ8TDR4 215 aa23.18■■□□□ 1.3
TTC39C-209ENST00000584250 SIGLEC12Q96PQ1 595 aa23.18■■□□□ 1.3
TTC39C-209ENST00000584250 RNF32Q9H0A6 362 aa23.18■■□□□ 1.3
TTC39C-209ENST00000584250 LIN28AQ9H9Z2 209 aaKnown RBP23.18■■□□□ 1.3
TTC39C-209ENST00000584250 MS4A12Q9NXJ0 267 aa23.18■■□□□ 1.3
TTC39C-209ENST00000584250 OR5H15A6NDH6 313 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms