RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 PARP9Q8IXQ6 854 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 ZCCHC7Q8N3Z6 543 aaKnown RBP23.31■■□□□ 1.32
TSEN54-209ENST00000583454 SELENOMQ8WWX9 145 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 TSLPQ969D9 159 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 IMMP1LQ96LU5 166 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 GATA5Q9BWX5 397 aaPredicted RBP23.31■■□□□ 1.32
TSEN54-209ENST00000583454 LHPPQ9H008 270 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 CENPHQ9H3R5 247 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 DDX31Q9H8H2 851 aaKnown RBP23.31■■□□□ 1.32
TSEN54-209ENST00000583454 BRF2Q9HAW0 419 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 ZNF160Q9HCG1 818 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 MID1IP1Q9NPA3 183 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 PRDM9Q9NQV7 894 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 MMACHCQ9Y4U1 282 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 CROCCQ5TZA2 2017 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 IGKV3D-11A0A0A0MRZ8 115 aa23.3■■□□□ 1.32
TSEN54-209ENST00000583454 NSG1A0A0A6YYJ2 146 aa23.3■■□□□ 1.32
TSEN54-209ENST00000583454 ALDH3A1P30838 453 aa23.3■■□□□ 1.32
TSEN54-209ENST00000583454 ETV4P43268 484 aa23.3■■□□□ 1.32
TSEN54-209ENST00000583454 ASPHQ12797 758 aa23.3■■□□□ 1.32
TSEN54-209ENST00000583454 AGAP7PQ5VUJ5 663 aa23.3■■□□□ 1.32
TSEN54-209ENST00000583454 ZNF595Q8IYB9 648 aa23.3■■□□□ 1.32
TSEN54-209ENST00000583454 PTCHD1Q96NR3 888 aa23.3■■□□□ 1.32
TSEN54-209ENST00000583454 AGAP4Q96P64 663 aa23.3■■□□□ 1.32
TSEN54-209ENST00000583454 MAPKAP1Q9BPZ7 522 aa23.3■■□□□ 1.32
TSEN54-209ENST00000583454 RIC8BQ9NVN3 520 aa23.3■■□□□ 1.32
TSEN54-209ENST00000583454 HSD3B1P14060 373 aa23.29■■□□□ 1.32
TSEN54-209ENST00000583454 HSD3B2P26439 372 aa23.29■■□□□ 1.32
TSEN54-209ENST00000583454 HNRNPFP52597 415 aaKnown RBP23.29■■□□□ 1.32
TSEN54-209ENST00000583454 HSD17B7P56937 341 aa23.29■■□□□ 1.32
TSEN54-209ENST00000583454 ZNF33BQ06732 778 aa23.29■■□□□ 1.32
TSEN54-209ENST00000583454 SLAMF1Q13291 335 aa23.29■■□□□ 1.32
TSEN54-209ENST00000583454 CASP8Q14790 479 aa23.29■■□□□ 1.32
TSEN54-209ENST00000583454 TCHHL1Q5QJ38 904 aaPredicted RBP23.29■■□□□ 1.32
TSEN54-209ENST00000583454 SCUBE1Q8IWY4 988 aa23.29■■□□□ 1.32
TSEN54-209ENST00000583454 TMEM52Q8NDY8 209 aa23.29■■□□□ 1.32
TSEN54-209ENST00000583454 ZBTB9Q96C00 473 aa23.29■■□□□ 1.32
TSEN54-209ENST00000583454 TRMOQ9BU70 441 aa23.29■■□□□ 1.32
TSEN54-209ENST00000583454 TUBB6Q9BUF5 446 aa23.29■■□□□ 1.32
TSEN54-209ENST00000583454 MRPS33Q9Y291 106 aaKnown RBP23.29■■□□□ 1.32
TSEN54-209ENST00000583454 CLDN16Q9Y5I7 305 aa23.29■■□□□ 1.32
TSEN54-209ENST00000583454 ABCA12Q86UK0 2595 aa23.28■■□□□ 1.32
TSEN54-209ENST00000583454 A0A0A6YYD5 115 aa23.28■■□□□ 1.32
TSEN54-209ENST00000583454 ULK1O75385 1050 aa23.28■■□□□ 1.32
TSEN54-209ENST00000583454 EEDO75530 441 aaKnown RBP23.28■■□□□ 1.32
TSEN54-209ENST00000583454 MYZAPP0CAP1 466 aa23.28■■□□□ 1.32
TSEN54-209ENST00000583454 MAOAP21397 527 aa23.28■■□□□ 1.32
TSEN54-209ENST00000583454 HMOX2P30519 316 aa23.28■■□□□ 1.32
TSEN54-209ENST00000583454 MRM1Q6IN84 353 aaKnown RBP23.28■■□□□ 1.32
TSEN54-209ENST00000583454 MAMDC2Q7Z304 686 aaPredicted RBP23.28■■□□□ 1.32
TSEN54-209ENST00000583454 FAM47BQ8NA70 645 aa23.28■■□□□ 1.32
TSEN54-209ENST00000583454 THOC3Q96J01 351 aaKnown RBP23.28■■□□□ 1.32
TSEN54-209ENST00000583454 CNDP1Q96KN2 507 aa23.28■■□□□ 1.32
TSEN54-209ENST00000583454 KCNA7Q96RP8 456 aa23.28■■□□□ 1.32
TSEN54-209ENST00000583454 CSF3RQ99062 836 aa23.28■■□□□ 1.32
TSEN54-209ENST00000583454 MECRQ9BV79 373 aa23.28■■□□□ 1.32
TSEN54-209ENST00000583454 NECTIN3Q9NQS3 549 aa23.28■■□□□ 1.32
TSEN54-209ENST00000583454 AHSPQ9NZD4 102 aa23.28■■□□□ 1.32
TSEN54-209ENST00000583454 SLC5A6Q9Y289 635 aa23.28■■□□□ 1.32
TSEN54-209ENST00000583454 TIMM22Q9Y584 194 aa23.28■■□□□ 1.32
TSEN54-209ENST00000583454 IGHV3-20A0A0C4DH32 117 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 TCRBV16S1A1N1A0A5B0 115 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 SERTM1A2A2V5 107 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 CLDN4O14493 209 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 SERPINA7P05543 415 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 BPGMP07738 259 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 COL8A1P27658 744 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 FOXA1P55317 472 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 CSTF3Q12996 717 aaKnown RBP23.27■■□□□ 1.32
TSEN54-209ENST00000583454 SFT2D3Q587I9 215 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 NUDT13Q86X67 352 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 KBTBD2Q8IY47 623 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 METTL4Q8N3J2 472 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 ST6GALNAC3Q8NDV1 305 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 DNAJB14Q8TBM8 379 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 PRTFDC1Q9NRG1 225 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 NMRK1Q9NWW6 199 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 MS4A12Q9NXJ0 267 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 ADAM29Q9UKF5 820 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 SLC12A4Q9UP95 1085 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 ASB4Q9Y574 426 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 SPACA6W5XKT8 324 aa23.27■■□□□ 1.32
TSEN54-209ENST00000583454 NPHS1O60500 1241 aa23.26■■□□□ 1.31
TSEN54-209ENST00000583454 CTNSO60931 367 aa23.26■■□□□ 1.31
TSEN54-209ENST00000583454 ICAM2P13598 275 aa23.26■■□□□ 1.31
TSEN54-209ENST00000583454 HTR6P50406 440 aa23.26■■□□□ 1.31
TSEN54-209ENST00000583454 OR4D2P58180 307 aa23.26■■□□□ 1.31
TSEN54-209ENST00000583454 TBL3Q12788 808 aaKnown RBP23.26■■□□□ 1.31
TSEN54-209ENST00000583454 MFAP5Q13361 173 aa23.26■■□□□ 1.31
TSEN54-209ENST00000583454 MPP2Q14168 576 aa23.26■■□□□ 1.31
TSEN54-209ENST00000583454 ZNF169Q14929 603 aaPredicted RBP23.26■■□□□ 1.31
TSEN54-209ENST00000583454 GPR180Q86V85 440 aa23.26■■□□□ 1.31
TSEN54-209ENST00000583454 GBP7Q8N8V2 638 aaPredicted RBP23.26■■□□□ 1.31
TSEN54-209ENST00000583454 OR6Y1Q8NGX8 325 aa23.26■■□□□ 1.31
TSEN54-209ENST00000583454 GRHL3Q8TE85 626 aa23.26■■□□□ 1.31
TSEN54-209ENST00000583454 PSMF1Q92530 271 aa23.26■■□□□ 1.31
TSEN54-209ENST00000583454 HBEGFQ99075 208 aa23.26■■□□□ 1.31
TSEN54-209ENST00000583454 MRPL1Q9BYD6 325 aaKnown RBP23.26■■□□□ 1.31
TSEN54-209ENST00000583454 STMN4Q9H169 189 aaPredicted RBP23.26■■□□□ 1.31
TSEN54-209ENST00000583454 TNFRSF12AQ9NP84 129 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms