RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 EEF1DP29692 281 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 BCL6P41182 706 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 ALDH18A1P54886 795 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 CDH13P55290 713 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 TAS2R50P59544 299 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 NAA20P61599 178 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 SNRPNP63162 240 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 TUBA3CQ13748 450 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 OR1C1Q15619 314 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 FCRLBQ6BAA4 426 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 TUBA3EQ6PEY2 450 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 SBSNQ6UWP8 590 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 RPS27LQ71UM5 84 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 VN1R4Q7Z5H5 301 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 ANKRD37Q7Z713 158 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 SPPL2CQ8IUH8 684 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 LRRC56Q8IYG6 542 aaPredicted RBP9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 CLYBLQ8N0X4 340 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 CPSF7Q8N684 471 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 TMEM178AQ8NBL3 297 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 FAM98AQ8NCA5 519 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 CAMKVQ8NCB2 501 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 MDS2Q8NDY4 140 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 M1APQ8TC57 530 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 ZNF483Q8TF39 744 aaPredicted RBP9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 ASB11Q8WXH4 323 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 MTFMTQ96DP5 389 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 MAELQ96JY0 434 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 SIGLEC12Q96PQ1 595 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 TRIM8Q9BZR9 551 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 WDR55Q9H6Y2 383 aaPredicted RBP9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 CCDC177Q9NQR7 707 aaPredicted RBP9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 KLHL1Q9NR64 748 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 ARMCX1Q9P291 453 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 TINAGQ9UJW2 476 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 PTBP2Q9UKA9 531 aaKnown RBP9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 ZNF835Q9Y2P0 537 aa9.12□□□□□ -0.95
CDK5RAP3-227ENST00000583352 SCN2AQ99250 2005 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 ASPDHA6ND91 283 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 GABRR3A8MPY1 467 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 SUPT3HB4E1H0 165 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 NPIPA5E9PKD4 350 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 GFYI3L273 518 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 SGK494L7N484 410 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 EIF3FO00303 357 aaPredicted RBP9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 SDHDO14521 159 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 TAPBPO15533 448 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 HNRNPCL1O60812 293 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 DIAPH2O60879 1101 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 SUPT3HO75486 399 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 WISP2O76076 250 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 SUPT7LO94864 414 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 RPS17P08708 135 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 GFAPP14136 432 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 TSPAN8P19075 237 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 IL10P22301 178 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 CALB2P22676 271 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 SSTR2P30874 369 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 CD96P40200 585 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 RGS4P49798 205 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 KCNJ2P63252 427 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 OC90Q02509 493 aaPredicted RBP9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 CLCQ05315 142 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 BTKQ06187 659 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 PCBP2Q15366 365 aaKnown RBP eCLIP9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 TBCCQ15814 346 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 PPP1R3AQ16821 1122 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 LSM12Q3MHD2 195 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 SFT2D3Q587I9 215 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 SH2D4BQ5SQS7 431 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 TMEM214Q6NUQ4 689 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 PAPD4Q6PIY7 484 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 Q6ZPB1 254 aaPredicted RBP9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 UBE2R2Q712K3 238 aaPredicted RBP9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 PRSS41Q7RTY9 318 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 ASPGQ86U10 573 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 SLC5A8Q8N695 610 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 HORMAD2Q8N7B1 307 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 ZCCHC10Q8TBK6 192 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 ACTRT2Q8TDY3 377 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 UTP4Q969X6 686 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 KLHL29Q96CT2 875 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 SCMH1Q96GD3 660 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 NSUN5Q96P11 429 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 LPAR4Q99677 370 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 MACROD1Q9BQ69 325 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 HES7Q9BYE0 225 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 NUF2Q9BZD4 464 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 PCBD2Q9H0N5 130 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 TSPAN10Q9H1Z9 355 aaPredicted RBP9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 LRMDAQ9H2I8 198 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 ZNF385DQ9H6B1 395 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 MMP25Q9NPA2 562 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 ANKRD10Q9NXR5 420 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 NUDT4Q9NZJ9 180 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 TAGLN3Q9UI15 199 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 ITGB1BP2Q9UKP3 347 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 NPIPA1Q9UND3 350 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 MEMO1Q9Y316 297 aa9.11□□□□□ -0.95
CDK5RAP3-227ENST00000583352 OR2W5A6NFC9 320 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms