RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 EGLN1Q9GZT9 426 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 WWP1Q9H0M0 922 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 DCLRE1BQ9H816 532 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 MARCH7Q9H992 704 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 COMMD8Q9NX08 183 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 PAK5Q9P286 719 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 TEKT2Q9UIF3 430 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 IGLV4-3A0A075B6K6 122 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 IGHV3OR16-10A0A075B7F0 116 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 SH3PXD2BA1X283 911 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 PDHXO00330 501 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 OR6A2O95222 327 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 OLFM2O95897 454 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 TBX6O95947 436 aaPredicted RBP4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 TPBGLP0DKB5 382 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 PCP11498 1178 aaKnown RBP4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 GLRA1P23415 457 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 ATP4BP51164 291 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 CRYBA2P53672 197 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 ARF5P84085 180 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 CBX3Q13185 183 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 SNAI3Q3KNW1 292 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 ZNF343Q6P1L6 599 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 METTL7BQ6UX53 244 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 B3GLCTQ6Y288 498 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 CDHR3Q6ZTQ4 885 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 GPRIN3Q6ZVF9 776 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 PEX5LQ8IYB4 626 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 MAPK1IP1LQ8NDC0 245 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 OR6F1Q8NGZ6 308 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 OR4L1Q8NH43 312 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 SSC4DQ8WTU2 575 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 MRPL24Q96A35 216 aaKnown RBP4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 MRPL53Q96EL3 112 aaKnown RBP4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 ZNF560Q96MR9 790 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 PRAM1Q96QH2 718 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 S1PR3Q99500 378 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 FAM213AQ9BRX8 229 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 CHCHD5Q9BSY4 110 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 ABCG4Q9H172 646 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 CXXC4Q9H2H0 198 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 DDX28Q9NUL7 540 aaKnown RBP4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 UBQLN2Q9UHD9 624 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 MRTO4Q9UKD2 239 aaKnown RBP4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 PCNX3Q9H6A9 2034 aa4.58□□□□□ -1.68
SMARCE1-219ENST00000583294 LOC390937A0A1W2PQ73 354 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 NEDD8-MDP1E9PL57 170 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 TLR4O00206 839 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 NTN3O00634 580 aaPredicted RBP4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 CCSO14618 274 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 KIAA0513O60268 411 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 ANXA9O76027 345 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 CYP3A5P20815 502 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 HERV-K104P63124 156 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 PAX8Q06710 450 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 MFGE8Q08431 387 aaPredicted RBP4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 ITPK1Q13572 414 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 RAPSNQ13702 412 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 DCAF12Q5T6F0 453 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 RNF130Q86XS8 419 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 NEK11Q8NG66 645 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 NPRL2Q8WTW4 380 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 TCP11Q8WWU5 503 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 GLYATL1Q969I3 302 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 C11orf52Q96A22 123 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 ZNF597Q96LX8 424 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 TAAR6Q96RI8 345 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 ATOH8Q96SQ7 321 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 STRADBQ9C0K7 418 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 DPEP3Q9H4B8 488 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 NMUR1Q9HB89 426 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 GDF3Q9NR23 364 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 CYP39A1Q9NYL5 469 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 TECRQ9NZ01 308 aaKnown RBP4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 NDUFA13Q9P0J0 144 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 NIP7Q9Y221 180 aaKnown RBP eCLIP4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 TDRKHQ9Y2W6 561 aaKnown RBP4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 TEX264Q9Y6I9 313 aa4.57□□□□□ -1.68
SMARCE1-219ENST00000583294 TRGV8A0A0C4DH27 118 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 SYCE3A1L190 88 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 SLC28A1O00337 649 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 FBP2O00757 339 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 GEMP55040 296 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 RPL27P61353 136 aaKnown RBP4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 OR1C1Q15619 314 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 TRADDQ15628 312 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 GLIPR1L2Q4G1C9 344 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 CARM1Q86X55 608 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 ABHD12Q8N2K0 398 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 BANPQ8N9N5 519 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 PCNPQ8WW12 178 aaKnown RBP4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 NABP1Q96AH0 204 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 ANKRD27Q96NW4 1050 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 RAB40CQ96S21 281 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 ATP6V0BQ99437 205 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 ZNF577Q9BSK1 485 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 LIME1Q9H400 295 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 DEPPQ9NTK1 212 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 CTSZQ9UBR2 303 aa4.56□□□□□ -1.68
SMARCE1-219ENST00000583294 TRBV5-4A0A0C4DH59 114 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms