RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 TRIM42Q8IWZ5 723 aa20.29■□□□□ 0.84
TSEN54-208ENST00000583173 FAM76AQ8TAV0 307 aa20.29■□□□□ 0.84
TSEN54-208ENST00000583173 VPS50Q96JG6 964 aa20.29■□□□□ 0.84
TSEN54-208ENST00000583173 ATP13A2Q9NQ11 1180 aa20.29■□□□□ 0.84
TSEN54-208ENST00000583173 TEX10Q9NXF1 929 aaPredicted RBP20.29■□□□□ 0.84
TSEN54-208ENST00000583173 MRPS33Q9Y291 106 aaKnown RBP20.29■□□□□ 0.84
TSEN54-208ENST00000583173 SPACA6W5XKT8 324 aa20.29■□□□□ 0.84
TSEN54-208ENST00000583173 NUP210LQ5VU65 1888 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 IGHV3-20A0A0C4DH32 117 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 LSM1O15116 133 aaKnown RBP20.28■□□□□ 0.84
TSEN54-208ENST00000583173 RGS14O43566 566 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 PRKRAO75569 313 aaKnown RBP20.28■□□□□ 0.84
TSEN54-208ENST00000583173 DNAJB5O75953 348 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 AIFM1O95831 613 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 CHEK2O96017 543 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 NEFHP12036 1026 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 TLX1P31314 330 aaPredicted RBP20.28■□□□□ 0.84
TSEN54-208ENST00000583173 RPL14P50914 215 aaKnown RBP20.28■□□□□ 0.84
TSEN54-208ENST00000583173 MAPK12P53778 367 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 OCRLQ01968 901 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 EEF1A2Q05639 463 aaKnown RBP20.28■□□□□ 0.84
TSEN54-208ENST00000583173 ACSM2AQ08AH3 577 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 SFT2D3Q587I9 215 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 ATG16L1Q676U5 607 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 ACSM2BQ68CK6 577 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 EFCAB3Q8N7B9 438 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 NFAM1Q8NET5 270 aaPredicted RBP20.28■□□□□ 0.84
TSEN54-208ENST00000583173 DNAJB14Q8TBM8 379 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 AGR3Q8TD06 166 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 CCT7Q99832 543 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 ALOXE3Q9BYJ1 711 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 PNPOQ9NVS9 261 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 C1orf109Q9NX04 203 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 VTI1BQ9UEU0 232 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 C19orf25Q9UFG5 118 aaPredicted RBP20.28■□□□□ 0.84
TSEN54-208ENST00000583173 PCDHA9Q9Y5H5 950 aa20.28■□□□□ 0.84
TSEN54-208ENST00000583173 LDB3O75112 727 aa20.27■□□□□ 0.84
TSEN54-208ENST00000583173 TIA1P31483 386 aaKnown RBP eCLIP20.27■□□□□ 0.84
TSEN54-208ENST00000583173 CCL11P51671 97 aa20.27■□□□□ 0.84
TSEN54-208ENST00000583173 POLE2P56282 527 aa20.27■□□□□ 0.84
TSEN54-208ENST00000583173 OR4D2P58180 307 aa20.27■□□□□ 0.84
TSEN54-208ENST00000583173 AIMP2Q13155 320 aaKnown RBP20.27■□□□□ 0.84
TSEN54-208ENST00000583173 SLC13A2Q13183 592 aa20.27■□□□□ 0.84
TSEN54-208ENST00000583173 RFTN2Q52LD8 501 aaPredicted RBP20.27■□□□□ 0.84
TSEN54-208ENST00000583173 SPDYAQ5MJ70 313 aa20.27■□□□□ 0.84
TSEN54-208ENST00000583173 C16orf78Q8WTQ4 265 aa20.27■□□□□ 0.84
TSEN54-208ENST00000583173 TUBB6Q9BUF5 446 aa20.27■□□□□ 0.84
TSEN54-208ENST00000583173 LRTM1Q9HBL6 345 aa20.27■□□□□ 0.84
TSEN54-208ENST00000583173 ZNF160Q9HCG1 818 aa20.27■□□□□ 0.84
TSEN54-208ENST00000583173 PPIEQ9UNP9 301 aaKnown RBP20.27■□□□□ 0.84
TSEN54-208ENST00000583173 ZFYVE26Q68DK2 2539 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 ARHGAP10A1A4S6 786 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 PCDH7O60245 1069 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 FGF17O60258 216 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 SEC22BO75396 215 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 GPR75O95800 540 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 JUNP05412 331 aaKnown RBP20.26■□□□□ 0.83
TSEN54-208ENST00000583173 BUD31P41223 144 aaPredicted RBP20.26■□□□□ 0.83
TSEN54-208ENST00000583173 GPR143P51810 404 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 BIKQ13323 160 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 IMPG1Q17R60 797 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 NDUFAF5Q5TEU4 345 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 NOXRED1Q6NXP6 359 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 CLNKQ7Z7G1 428 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 OR4N5Q8IXE1 308 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 MMP21Q8N119 569 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 GALNT16Q8N428 558 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 PSMF1Q92530 271 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 HEY2Q9UBP5 337 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 TUBD1Q9UJT1 453 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 IGSF10Q6WRI0 2623 aa20.26■□□□□ 0.83
TSEN54-208ENST00000583173 CHD6Q8TD26 2715 aa20.25■□□□□ 0.83
TSEN54-208ENST00000583173 NSG1A0A0A6YYJ2 146 aa20.25■□□□□ 0.83
TSEN54-208ENST00000583173 GLOD5A6NK44 160 aa20.25■□□□□ 0.83
TSEN54-208ENST00000583173 GUCY1B2O75343 617 aa20.25■□□□□ 0.83
TSEN54-208ENST00000583173 NR2F6P10588 404 aa20.25■□□□□ 0.83
TSEN54-208ENST00000583173 PPP2R1BP30154 601 aa20.25■□□□□ 0.83
TSEN54-208ENST00000583173 ACTN3Q08043 901 aaPredicted RBP20.25■□□□□ 0.83
TSEN54-208ENST00000583173 SERTAD2Q14140 314 aa20.25■□□□□ 0.83
TSEN54-208ENST00000583173 PLAG1Q6DJT9 500 aa20.25■□□□□ 0.83
TSEN54-208ENST00000583173 PAPD4Q6PIY7 484 aaKnown RBP20.25■□□□□ 0.83
TSEN54-208ENST00000583173 PARP9Q8IXQ6 854 aa20.25■□□□□ 0.83
TSEN54-208ENST00000583173 LSM14AQ8ND56 463 aaKnown RBP20.25■□□□□ 0.83
TSEN54-208ENST00000583173 C7orf57Q8NEG2 295 aa20.25■□□□□ 0.83
TSEN54-208ENST00000583173 UBL7Q96S82 380 aaPredicted RBP20.25■□□□□ 0.83
TSEN54-208ENST00000583173 ADNPQ9H2P0 1102 aa20.25■□□□□ 0.83
TSEN54-208ENST00000583173 RIC8BQ9NVN3 520 aa20.25■□□□□ 0.83
TSEN54-208ENST00000583173 EXO1Q9UQ84 846 aaKnown RBP20.25■□□□□ 0.83
TSEN54-208ENST00000583173 DLGAP4Q9Y2H0 992 aa20.25■□□□□ 0.83
TSEN54-208ENST00000583173 WBP11Q9Y2W2 641 aaKnown RBP20.25■□□□□ 0.83
TSEN54-208ENST00000583173 PIEZO2Q9H5I5 2752 aa20.25■□□□□ 0.83
TSEN54-208ENST00000583173 MYOCOSA0A1B0GUC4 107 aa20.24■□□□□ 0.83
TSEN54-208ENST00000583173 SYNDIG1LA6NDD5 238 aa20.24■□□□□ 0.83
TSEN54-208ENST00000583173 SEC24DO94855 1032 aaPredicted RBP20.24■□□□□ 0.83
TSEN54-208ENST00000583173 SERPINA7P05543 415 aa20.24■□□□□ 0.83
TSEN54-208ENST00000583173 CELA2AP08217 269 aa20.24■□□□□ 0.83
TSEN54-208ENST00000583173 ANXA4P09525 319 aaPredicted RBP20.24■□□□□ 0.83
TSEN54-208ENST00000583173 FAM87AP0C7U9 286 aa20.24■□□□□ 0.83
TSEN54-208ENST00000583173 PRR35P0CG20 571 aa20.24■□□□□ 0.83
TSEN54-208ENST00000583173 ICAM2P13598 275 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms