RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SLC13A2Q13183 592 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 SERTAD2Q14140 314 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 SQLEQ14534 574 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 SYT16Q17RD7 645 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 PDCD4Q53EL6 469 aaKnown RBP13.46□□□□□ -0.25
SKA2-205ENST00000580541 FAM71E1Q6IPT2 247 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 CGB2Q6NT52 195 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 FAM199XQ6PEV8 388 aaPredicted RBP13.46□□□□□ -0.25
SKA2-205ENST00000580541 QSOX2Q6ZRP7 698 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 PLPP5Q8NEB5 264 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 VPS37AQ8NEZ2 397 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 OR4K14Q8NGD5 310 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 BCAS4Q8TDM0 211 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 C10orf82Q8WW14 230 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 ZNF764Q96H86 408 aaPredicted RBP13.46□□□□□ -0.25
SKA2-205ENST00000580541 TSSK3Q96PN8 268 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 BRINP2Q9C0B6 783 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 GPN2Q9H9Y4 310 aaPredicted RBP13.46□□□□□ -0.25
SKA2-205ENST00000580541 SEMA3GQ9NS98 782 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 SLC22A11Q9NSA0 550 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 TAS2R7Q9NYW3 318 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 ZIM2Q9NZV7 527 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 C19orf25Q9UFG5 118 aaPredicted RBP13.46□□□□□ -0.25
SKA2-205ENST00000580541 GIMAP2Q9UG22 337 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 BAIAP2L1Q9UHR4 511 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 CROTQ9UKG9 612 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 MKL2Q9ULH7 1088 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 GPR45Q9Y5Y3 372 aa13.46□□□□□ -0.25
SKA2-205ENST00000580541 TEX51A0A1B0GUA7 166 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 DYRK3O43781 588 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 TBX19O60806 448 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 GPR75O95800 540 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 AIFM1O95831 613 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 RECKO95980 971 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 MRPL19P49406 292 aaKnown RBP13.45□□□□□ -0.26
SKA2-205ENST00000580541 DIO3P55073 304 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 C21orf58P58505 322 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 MC1RQ01726 317 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 DNASE1L3Q13609 305 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 SSPNQ14714 243 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 VWA2Q5GFL6 755 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 CPTPQ5TA50 214 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 C18orf63Q68DL7 685 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 SLC48A1Q6P1K1 146 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 COX15Q7KZN9 410 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 ZC3H7AQ8IWR0 971 aaKnown RBP13.45□□□□□ -0.26
SKA2-205ENST00000580541 DTWD1Q8N5C7 304 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 FAM47BQ8NA70 645 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 OR2Y1Q8NGV0 311 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.45□□□□□ -0.264e-17■■■■■ 47.6
SKA2-205ENST00000580541 CT55Q8WUE5 264 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 PPCDCQ96CD2 204 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 RBM18Q96H35 190 aaKnown RBP13.45□□□□□ -0.26
SKA2-205ENST00000580541 PTCHD1Q96NR3 888 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 IP6K3Q96PC2 410 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 PELOQ9BRX2 385 aaKnown RBP13.45□□□□□ -0.26
SKA2-205ENST00000580541 CRB3Q9BUF7 120 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 SDR39U1Q9NRG7 319 aaPredicted RBP13.45□□□□□ -0.26
SKA2-205ENST00000580541 SH3BP4Q9P0V3 963 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 HEY2Q9UBP5 337 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 PTRH2Q9Y3E5 179 aaKnown RBP13.45□□□□□ -0.26
SKA2-205ENST00000580541 PCDHGA6Q9Y5G7 932 aa13.45□□□□□ -0.26
SKA2-205ENST00000580541 DYTNA2CJ06 578 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 FAM227AF5H4B4 570 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 SLC22A2O15244 555 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 RRP8O43159 456 aaKnown RBP13.44□□□□□ -0.26
SKA2-205ENST00000580541 AKAP10O43572 662 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 DNAJB6O75190 326 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 DCTN3O75935 186 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 IL6P05231 212 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 ALDOCP09972 364 aaKnown RBP13.44□□□□□ -0.26
SKA2-205ENST00000580541 COX7A2P14406 83 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 CSNK2A2P19784 350 aaPredicted RBP13.44□□□□□ -0.26
SKA2-205ENST00000580541 TACR1P25103 407 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 MPIP34949 423 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 SNRPNP63162 240 aaKnown RBP13.44□□□□□ -0.26
SKA2-205ENST00000580541 LRRC74AQ0VAA2 488 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 PTGR1Q14914 329 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 NSDHLQ15738 373 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 LCN10Q6JVE6 187 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 FAM198BQ6UWH4 519 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 ENDOVQ8N8Q3 282 aaKnown RBP13.44□□□□□ -0.26
SKA2-205ENST00000580541 CCDC197Q8NCU1 140 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 SNIP1Q8TAD8 396 aaKnown RBP13.44□□□□□ -0.26
SKA2-205ENST00000580541 DNAJB14Q8TBM8 379 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 KCNE4Q8WWG9 221 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 TESCQ96BS2 214 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 RNF31Q96EP0 1072 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 EGLN2Q96KS0 407 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 CATSPER2Q96P56 530 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 AKIRIN1Q9H9L7 192 aaPredicted RBP13.44□□□□□ -0.26
SKA2-205ENST00000580541 WDR70Q9NW82 654 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 TEX10Q9NXF1 929 aaPredicted RBP13.44□□□□□ -0.26
SKA2-205ENST00000580541 CTSFQ9UBX1 484 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 ATP6V1HQ9UI12 483 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 C3orf18Q9UK00 162 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 UTS2RQ9UKP6 389 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 TCFL5Q9UL49 500 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 G3BP2Q9UN86 482 aaKnown RBP13.44□□□□□ -0.26
SKA2-205ENST00000580541 ENTPD4Q9Y227 616 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms