RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 KLK1P06870 262 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 CHN1P15882 459 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 TPP2P29144 1249 aaPredicted RBP17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 DEKP35659 375 aaKnown RBP17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 TNFSF10P50591 281 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 FOXA1P55317 472 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 TLR1Q15399 786 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 CYP20A1Q6UW02 462 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 IQCKQ8N0W5 287 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 METTL4Q8N3J2 472 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 OR1N1Q8NGS0 311 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 RDH11Q8TC12 318 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 METTL6Q8TCB7 284 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 AGAP11Q8TF27 550 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 CCDC126Q96EE4 140 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 ZNF354BQ96LW1 612 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 CDCP1Q9H5V8 836 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 RPF2Q9H7B2 306 aaKnown RBP17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 MID1IP1Q9NPA3 183 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 ADAP2Q9NPF8 381 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 OXSMQ9NWU1 459 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 LYARQ9NX58 379 aaKnown RBP17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 MS4A12Q9NXJ0 267 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 ANKRD10Q9NXR5 420 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 SLC17A7Q9P2U7 560 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 TEKT2Q9UIF3 430 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 PHF11Q9UIL8 331 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 ZNF223Q9UK11 482 aaPredicted RBP17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 NTNG1Q9Y2I2 539 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 PLLPQ9Y342 182 aa17.43■□□□□ 0.38
PPP4R1-215ENST00000580182 TENM4Q6N022 2769 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 CNTRLQ7Z7A1 2325 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 ARHGAP10A1A4S6 786 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 ZIC2O95409 532 aaPredicted RBP17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 HMOX2P30519 316 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 GPR143P51810 404 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 PKNOX1P55347 436 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 DNAJB13P59910 316 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 FOLH1Q04609 750 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 ZNF844Q08AG5 666 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 GALNT1Q10472 559 aaPredicted RBP17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 TBL3Q12788 808 aaKnown RBP17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 PCLAFQ15004 111 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 MEP1AQ16819 746 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 C10orf62Q5T681 223 aaPredicted RBP17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 SCIMPQ6UWF3 145 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 C10orf107Q8IVU9 208 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 B3GNT7Q8NFL0 401 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 PTPMT1Q8WUK0 201 aaPredicted RBP17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 SREK1Q8WXA9 508 aaKnown RBP17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 NCLNQ969V3 563 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 TMEM109Q9BVC6 243 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 SLC29A3Q9BZD2 475 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.42■□□□□ 0.381e-6■□□□□ 10.1
PPP4R1-215ENST00000580182 BRF2Q9HAW0 419 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 TNFRSF12AQ9NP84 129 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 ASF1BQ9NVP2 202 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 MKS1Q9NXB0 559 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 TEX10Q9NXF1 929 aaPredicted RBP17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 VTI1BQ9UEU0 232 aa17.42■□□□□ 0.38
PPP4R1-215ENST00000580182 BAHCC1Q9P281 2608 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 TRBV11-1A0A0K0K1C0 115 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 BLACEA4D250 179 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 OR5H15A6NDH6 313 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 PRKNO60260 465 aaPredicted RBP17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 ESRRBO95718 433 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 AIFM1O95831 613 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 KRT6AP02538 564 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 KRT6BP04259 564 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 BUD31P41223 144 aaPredicted RBP17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 KRT6CP48668 564 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 TAS2R50P59544 299 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 KCNC4Q03721 635 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 SERTAD2Q14140 314 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 TERF2Q15554 542 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 ELAVL1Q15717 326 aaKnown RBP17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 KRT71Q3SY84 523 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 DGAT2L6Q6ZPD8 337 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 FRMD7Q6ZUT3 714 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 COMMD6Q7Z4G1 85 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 RPS19BP1Q86WX3 136 aaKnown RBP17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 SLC5A8Q8N695 610 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 ZNF321PQ8N8H1 164 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 DOK4Q8TEW6 326 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 THAP3Q8WTV1 239 aaPredicted RBP17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 PPWD1Q96BP3 646 aaKnown RBP17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 FAM111AQ96PZ2 611 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 SHCBP1LQ9BZQ2 653 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 IQCGQ9H095 443 aaKnown RBP17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 RNF32Q9H0A6 362 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 AHSPQ9NZD4 102 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 PPIEQ9UNP9 301 aaKnown RBP17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 STK38LQ9Y2H1 464 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 RELNP78509 3460 aa17.41■□□□□ 0.38
PPP4R1-215ENST00000580182 SHANK1Q9Y566 2161 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 C17orf105B2RV13 164 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 PGRMC2O15173 223 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 ULK1O75385 1050 aa17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 ENO1P06733 434 aaKnown RBP17.4■□□□□ 0.38
PPP4R1-215ENST00000580182 NR2F6P10588 404 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms