RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 TMEM52Q8NDY8 209 aa12.74□□□□□ -0.37
GGA3-208ENST00000579743 OR2M7Q8NG81 312 aa12.74□□□□□ -0.37
GGA3-208ENST00000579743 OR7G3Q8NG95 312 aa12.74□□□□□ -0.37
GGA3-208ENST00000579743 RHEBL1Q8TAI7 183 aa12.74□□□□□ -0.37
GGA3-208ENST00000579743 SLC22A8Q8TCC7 542 aa12.74□□□□□ -0.37
GGA3-208ENST00000579743 SLC2A12Q8TD20 617 aa12.74□□□□□ -0.37
GGA3-208ENST00000579743 ZNF473Q8WTR7 871 aaKnown RBP12.74□□□□□ -0.37
GGA3-208ENST00000579743 PTPMT1Q8WUK0 201 aaPredicted RBP12.74□□□□□ -0.37
GGA3-208ENST00000579743 TANKQ92844 425 aa12.74□□□□□ -0.37
GGA3-208ENST00000579743 RASL10BQ96S79 203 aa12.74□□□□□ -0.37
GGA3-208ENST00000579743 DMRTA2Q96SC8 542 aa12.74□□□□□ -0.37
GGA3-208ENST00000579743 MS4A8Q9BY19 250 aa12.74□□□□□ -0.37
GGA3-208ENST00000579743 RPF2Q9H7B2 306 aaKnown RBP12.74□□□□□ -0.37
GGA3-208ENST00000579743 ACTR8Q9H981 624 aa12.74□□□□□ -0.37
GGA3-208ENST00000579743 WDR41Q9HAD4 459 aa12.74□□□□□ -0.37
GGA3-208ENST00000579743 SLC24A3Q9HC58 644 aa12.74□□□□□ -0.37
GGA3-208ENST00000579743 SACM1LQ9NTJ5 587 aa12.74□□□□□ -0.37
GGA3-208ENST00000579743 TNPO3Q9Y5L0 923 aaKnown RBP12.74□□□□□ -0.37
GGA3-208ENST00000579743 GTF3C1Q12789 2109 aa12.74□□□□□ -0.37
GGA3-208ENST00000579743 FOXO6A8MYZ6 492 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 BCKDKO14874 412 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 LDB3O75112 727 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 PDE9AO76083 593 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 SLC35E2BP0CK96 405 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 PTX3P26022 381 aaPredicted RBP12.73□□□□□ -0.37
GGA3-208ENST00000579743 SOX3P41225 446 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 PIK3CBP42338 1070 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 HK2P52789 917 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 CKAP4Q07065 602 aaKnown RBP12.73□□□□□ -0.37
GGA3-208ENST00000579743 PCDH1Q08174 1060 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 C2orf54Q08AI8 447 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 SLAMF1Q13291 335 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 DDX39BQ13838 428 aaKnown RBP12.73□□□□□ -0.37
GGA3-208ENST00000579743 CMPK2Q5EBM0 449 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 DEPDC1Q5TB30 811 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 LIPJQ5W064 366 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 GRHL2Q6ISB3 625 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 FAM47EQ6ZV65 393 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 DND1Q8IYX4 353 aaKnown RBP12.73□□□□□ -0.37
GGA3-208ENST00000579743 TEX9Q8N6V9 391 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 FBF1Q8TES7 1133 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 UBTD2Q8WUN7 234 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 LURAP1Q96LR2 239 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 CSF3RQ99062 836 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 MAPKAP1Q9BPZ7 522 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 DEFB127Q9H1M4 99 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 GRHL1Q9NZI5 618 aa12.73□□□□□ -0.37
GGA3-208ENST00000579743 ZNF223Q9UK11 482 aaPredicted RBP12.73□□□□□ -0.37
GGA3-208ENST00000579743 NBPF19A0A087WUL8 3843 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 PCNX1Q96RV3 2341 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 IQANK1A0A1B0GTG1 560 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 OR14I1A6ND48 311 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 FIGNL2A6NMB9 653 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 TGFBR3LH3BV60 316 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 UBXN8O00124 270 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 OR10H2O60403 315 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 UGDHO60701 494 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 OR6B1O95007 311 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 SCELO95171 688 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 CD22P20273 847 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 CHRNB4P30926 498 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 ARL1P40616 181 aaPredicted RBP12.72□□□□□ -0.37
GGA3-208ENST00000579743 STT3AP46977 705 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 GPX6P59796 221 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 E2F2Q14209 437 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 ACAP2Q15057 778 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 MPEG1Q2M385 716 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 METTL2BQ6P1Q9 378 aaKnown RBP12.72□□□□□ -0.37
GGA3-208ENST00000579743 CYP20A1Q6UW02 462 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 SLC29A4Q7RTT9 530 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 CMC1Q7Z7K0 106 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 GPR180Q86V85 440 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 SLC15A4Q8N697 577 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 OR5M3Q8NGP4 307 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 FBXO25Q8TCJ0 367 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 C14orf79Q96F83 325 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 TSPYL1Q9H0U9 437 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 LDAHQ9H6V9 325 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 EXO5Q9H790 373 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 LIN28AQ9H9Z2 209 aaKnown RBP12.72□□□□□ -0.37
GGA3-208ENST00000579743 KCNJ16Q9NPI9 418 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 LYARQ9NX58 379 aaKnown RBP12.72□□□□□ -0.37
GGA3-208ENST00000579743 PYCARDQ9ULZ3 195 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 TSC22D4Q9Y3Q8 395 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 CLDN16Q9Y5I7 305 aa12.72□□□□□ -0.37
GGA3-208ENST00000579743 MYOCOSA0A1B0GUC4 107 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 FAM166BA8MTA8 275 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 FAM47E-STBD1D6RA91 191 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 RTCAO00442 366 aaKnown RBP12.71□□□□□ -0.37
GGA3-208ENST00000579743 PRKNO60260 465 aaPredicted RBP12.71□□□□□ -0.37
GGA3-208ENST00000579743 PRAMEF4O60810 478 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 SH3BGRLO75368 114 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 TBX6O95947 436 aaPredicted RBP12.71□□□□□ -0.37
GGA3-208ENST00000579743 TYK2P29597 1187 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 ALDH18A1P54886 795 aaKnown RBP12.71□□□□□ -0.37
GGA3-208ENST00000579743 ETF1P62495 437 aaKnown RBP12.71□□□□□ -0.37
GGA3-208ENST00000579743 SLC10A1Q14973 349 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 UAP1Q16222 522 aaPredicted RBP12.71□□□□□ -0.37
GGA3-208ENST00000579743 PFKFB4Q16877 469 aa12.71□□□□□ -0.37
GGA3-208ENST00000579743 ZNF750Q32MQ0 723 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms