RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 SLC13A2Q13183 592 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 NKG7Q16617 165 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 SYT16Q17RD7 645 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 LSM12Q3MHD2 195 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 NDUFAF5Q5TEU4 345 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 METTL21CQ5VZV1 264 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 FAM219BQ5XKK7 198 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 FAM199XQ6PEV8 388 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 FAM198BQ6UWH4 519 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 QSOX2Q6ZRP7 698 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 MED25Q71SY5 747 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 COX15Q7KZN9 410 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 SPATA21Q7Z572 469 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 SAMD14Q8IZD0 417 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 LIX1Q8N485 282 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ENDOVQ8N8Q3 282 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 FAM47BQ8NA70 645 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 OR2Y1Q8NGV0 311 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 RFWD2Q8NHY2 731 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 SNIP1Q8TAD8 396 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 TANKQ92844 425 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 MTERF3Q96E29 417 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 C11orf24Q96F05 449 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 THOC1Q96FV9 657 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ZBTB18Q99592 522 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 MAPKAP1Q9BPZ7 522 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 CRB3Q9BUF7 120 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 DPY30Q9C005 99 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 PRTFDC1Q9NRG1 225 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 SEMA3GQ9NS98 782 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ATAD3AQ9NVI7 634 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 GIMAP2Q9UG22 337 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ENTPD4Q9Y227 616 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 DLGAP4Q9Y2H0 992 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 PTRH2Q9Y3E5 179 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ASB4Q9Y574 426 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ACACAQ13085 2346 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 VSTM2BA6NLU5 285 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 E9PBE3 544 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 DYRK3O43781 588 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 KLHL41O60662 606 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 B4GALT2O60909 372 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 CTNSO60931 367 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 BMP10O95393 424 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 AIFM1O95831 613 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 SDC1P18827 310 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 DDCP20711 480 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 PRPS1L1P21108 318 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 PIK3R1P27986 724 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 PTPN4P29074 926 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ALDH9A1P49189 494 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 SEC24CP53992 1094 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 EMP2P54851 167 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 HNRNPH2P55795 449 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 SERTAD2Q14140 314 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 DPY19L1Q2PZI1 675 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 VWA2Q5GFL6 755 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 C6orf163Q5TEZ5 329 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 BROXQ5VW32 411 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 LRRC69Q6ZNQ3 347 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 MAVSQ7Z434 540 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 RAB43Q86YS6 212 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ZC3H7AQ8IWR0 971 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 MIER2Q8N344 545 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 DTWD1Q8N5C7 304 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 NATD1Q8N6N6 113 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ZSCAN1Q8NBB4 408 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 GLB1L3Q8NCI6 653 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 NACC2Q96BF6 587 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 TM4SF18Q96CE8 201 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 TSSK3Q96PN8 268 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 OR52B2Q96RD2 323 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ELAC2Q9BQ52 826 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 PELOQ9BRX2 385 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 RBCK1Q9BYM8 510 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 RABEP2Q9H5N1 569 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 SOX17Q9H6I2 414 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 SLC22A11Q9NSA0 550 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 AIG1Q9NVV5 245 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 EHD3Q9NZN3 535 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 CTSFQ9UBX1 484 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 TCFL5Q9UL49 500 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 MKL2Q9ULH7 1088 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ATG4BQ9Y4P1 393 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 PCDHGA6Q9Y5G7 932 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 PCDHA9Q9Y5H5 950 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ZNF780BQ9Y6R6 833 aa10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 FLNBO75369 2602 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-210ENST00000578733 LOC101059948A0A1B0GTJ6 334 aa10.61□□□□□ -0.71
CDK5RAP3-210ENST00000578733 G6PDP11413 515 aa10.61□□□□□ -0.71
CDK5RAP3-210ENST00000578733 COX7A2P14406 83 aa10.61□□□□□ -0.71
CDK5RAP3-210ENST00000578733 NCF2P19878 526 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-210ENST00000578733 DRD4P21917 467 aa10.61□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ATP4BP51164 291 aa10.61□□□□□ -0.71
CDK5RAP3-210ENST00000578733 SQLEQ14534 574 aa10.61□□□□□ -0.71
CDK5RAP3-210ENST00000578733 PDCD4Q53EL6 469 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-210ENST00000578733 GKAP1Q5VSY0 366 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-210ENST00000578733 FAM71E1Q6IPT2 247 aa10.61□□□□□ -0.71
CDK5RAP3-210ENST00000578733 CGB2Q6NT52 195 aa10.61□□□□□ -0.71
CDK5RAP3-210ENST00000578733 PIGWQ7Z7B1 504 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms