RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	ABCA2	Q9BZC7	2435 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329		A0A0A6YYD5	115 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OR7A17	O14581	309 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PGRMC2	O15173	223 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PFDN6	O15212	129 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TRIM3	O75382	744 aa	Predicted RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NME6	O75414	186 aa	Predicted RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	STK16	O75716	305 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SIX3	O95343	332 aa	Predicted RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TGFB1	P01137	390 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ALDOA	P04075	364 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TPO	P07202	933 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	COX6B1	P14854	86 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TCP1	P17987	556 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GNAZ	P19086	355 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HIST1H2AD	P20671	130 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HIST1H1T	P22492	207 aa	Predicted RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	JAK1	P23458	1154 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GCA	P28676	217 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PTGS2	P35354	604 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MAGEA12	P43365	314 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SLCO1A2	P46721	670 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PIK3CG	P48736	1102 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HNMT	P50135	292 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CLCN2	P51788	898 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NEK2	P51955	445 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SLC37A1	P57057	533 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	POU4F1	Q01851	419 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TLE4	Q04727	773 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RGS1	Q08116	209 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	C2orf54	Q08AI8	447 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PMPCA	Q10713	525 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ASPH	Q12797	758 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CHIT1	Q13231	466 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	BMPR2	Q13873	1038 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ELAVL1	Q15717	326 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PIGG	Q5H8A4	983 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CDKL4	Q5MAI5	379 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DEPDC1	Q5TB30	811 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PLXDC2	Q6UX71	529 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	IL20RB	Q6UXL0	311 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MEX3B	Q6ZN04	569 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CEP128	Q6ZU80	1094 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TRIL	Q7L0X0	811 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ABHD13	Q7L211	337 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GDF7	Q7Z4P5	450 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ADAMTSL2	Q86TH1	951 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LSR	Q86X29	649 aa	Predicted RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF595	Q8IYB9	648 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZBED8	Q8IZ13	594 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PDIK1L	Q8N165	341 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CYP4Z2P	Q8N1L4	340 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NKAP	Q8N5F7	415 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF615	Q8N8J6	731 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TMEM178A	Q8NBL3	297 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	BBOF1	Q8ND07	529 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SPATA4	Q8NEY3	305 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OR10G3	Q8NGC4	313 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OR5M9	Q8NGP3	310 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HUS1B	Q8NHY5	278 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	WDR20	Q8TBZ3	569 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FBXO25	Q8TCJ0	367 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SLC2A12	Q8TD20	617 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PAQR8	Q8TEZ7	354 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GRK7	Q8WTQ7	553 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	KCTD4	Q8WVF5	259 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ATL1	Q8WXF7	558 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ADIPOR1	Q96A54	375 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NXNL1	Q96CM4	212 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	VMP1	Q96GC9	406 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	POM121	Q96HA1	1249 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SENP5	Q96HI0	755 aa	Predicted RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	VPS50	Q96JG6	964 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MAGED4	Q96JG8	741 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HIST1H2AH	Q96KK5	128 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NSUN5	Q96P11	429 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SERINC2	Q96SA4	455 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HIST1H2AJ	Q99878	128 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SH3GL2	Q99962	352 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ERP44	Q9BS26	406 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TTYH2	Q9BSA4	534 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	H2AFJ	Q9BTM1	129 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DEFB126	Q9BYW3	111 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CD244	Q9BZW8	370 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	REXO4	Q9GZR2	422 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CXXC4	Q9H2H0	198 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SLC6A15	Q9H2J7	730 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DPH5	Q9H2P9	285 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	UBQLN3	Q9H347	655 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ALG9	Q9H6U8	611 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GRPEL1	Q9HAV7	217 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GPAM	Q9HCL2	828 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LYRM4	Q9HD34	91 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CHST11	Q9NPF2	352 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ADAP2	Q9NPF8	381 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PPAN	Q9NQ55	473 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DMRT3	Q9NQL9	472 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DNAJC11	Q9NVH1	559 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms