RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 RNF32Q9H0A6 362 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 ELOVL6Q9H5J4 265 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 PRDM9Q9NQV7 894 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 KCMF1Q9P0J7 381 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 MMACHCQ9Y4U1 282 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 A0A0A6YYD5 115 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 IGHV3-20A0A0C4DH32 117 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 TCRBV16S1A1N1A0A5B0 115 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 TYROBPO43914 113 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 PRMT3O60678 531 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 SEC24DO94855 1032 aaPredicted RBP11.96□□□□□ -0.49
CCDC57-211ENST00000578187 RASAL1O95294 804 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 ESRRBO95718 433 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 CLDN1O95832 211 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 ENO1P06733 434 aaKnown RBP11.96□□□□□ -0.49
CCDC57-211ENST00000578187 BSGP35613 385 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 HNRNPFP52597 415 aaKnown RBP11.96□□□□□ -0.49
CCDC57-211ENST00000578187 HSD17B7P56937 341 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 BTG2P78543 158 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 RCN2Q14257 317 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 NSDHLQ15738 373 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 EXT1Q16394 746 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 BTBD16Q32M84 506 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 SFT2D3Q587I9 215 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 TNFAIP8L3Q5GJ75 292 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 CEP85LQ5SZL2 805 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 LIPMQ5VYY2 423 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 FAM219BQ5XKK7 198 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 PLAG1Q6DJT9 500 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 TTC19Q6DKK2 380 aaPredicted RBP11.96□□□□□ -0.49
CCDC57-211ENST00000578187 OR4C11Q6IEV9 310 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 LRIG3Q6UXM1 1119 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 C10orf107Q8IVU9 208 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 ZNF595Q8IYB9 648 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 SLC34A3Q8N130 599 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 CDYL2Q8N8U2 506 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 CCDC63Q8NA47 563 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 FAM47BQ8NA70 645 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 ARMC2Q8NEN0 867 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 MAPKAP1Q9BPZ7 522 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 SLX1AQ9BQ83 275 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 SORBS1Q9BX66 1292 aaKnown RBP11.96□□□□□ -0.49
CCDC57-211ENST00000578187 BRF2Q9HAW0 419 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 PRM3Q9NNZ6 103 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 NECTIN3Q9NQS3 549 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 FARSBQ9NSD9 589 aaKnown RBP11.96□□□□□ -0.49
CCDC57-211ENST00000578187 PLA2G3Q9NZ20 509 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 STMN3Q9NZ72 180 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 SNX6Q9UNH7 406 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 MRPS33Q9Y291 106 aaKnown RBP11.96□□□□□ -0.49
CCDC57-211ENST00000578187 CLDN16Q9Y5I7 305 aa11.96□□□□□ -0.49
CCDC57-211ENST00000578187 USP9YO00507 2555 aaPredicted RBP11.96□□□□□ -0.5
CCDC57-211ENST00000578187 UTP20O75691 2785 aaKnown RBP11.96□□□□□ -0.5
CCDC57-211ENST00000578187 OR5H15A6NDH6 313 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 H3BQF6 201 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 UBFD1O14562 309 aaKnown RBP11.95□□□□□ -0.5
CCDC57-211ENST00000578187 RGS16O15492 202 aaPredicted RBP11.95□□□□□ -0.5
CCDC57-211ENST00000578187 SPAG7O75391 227 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 EEDO75530 441 aaKnown RBP11.95□□□□□ -0.5
CCDC57-211ENST00000578187 PDYNP01213 254 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 KRT6AP02538 564 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 KRT6BP04259 564 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 CELA2AP08217 269 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 ITGAMP11215 1152 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 HSD3B1P14060 373 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 CREB1P16220 341 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 MAOAP21397 527 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 HSD3B2P26439 372 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 DCTP40126 519 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 KRT6CP48668 564 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 NAGLUP54802 743 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 RBPJQ06330 500 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 TCHHL1Q5QJ38 904 aaPredicted RBP11.95□□□□□ -0.5
CCDC57-211ENST00000578187 BEND6Q5SZJ8 279 aaPredicted RBP11.95□□□□□ -0.5
CCDC57-211ENST00000578187 MRM1Q6IN84 353 aaKnown RBP11.95□□□□□ -0.5
CCDC57-211ENST00000578187 PAPD4Q6PIY7 484 aaKnown RBP11.95□□□□□ -0.5
CCDC57-211ENST00000578187 CROCCP2Q86T23 111 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 NUDT13Q86X67 352 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 CCNYL1Q8N7R7 359 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 DNAJB8Q8NHS0 232 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 TCP10LQ8TDR4 215 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 SELENOMQ8WWX9 145 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 PSMF1Q92530 271 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 NR4A3Q92570 626 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 MTFMTQ96DP5 389 aaKnown RBP11.95□□□□□ -0.5
CCDC57-211ENST00000578187 ZNF354BQ96LW1 612 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 PTCHD1Q96NR3 888 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 FAM111AQ96PZ2 611 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 LPAR4Q99677 370 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 DDX31Q9H8H2 851 aaKnown RBP11.95□□□□□ -0.5
CCDC57-211ENST00000578187 SSU72Q9NP77 194 aaKnown RBP11.95□□□□□ -0.5
CCDC57-211ENST00000578187 PRTFDC1Q9NRG1 225 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 SLC17A7Q9P2U7 560 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 SUCOQ9UBS9 1254 aaKnown RBP11.95□□□□□ -0.5
CCDC57-211ENST00000578187 PHF11Q9UIL8 331 aa11.95□□□□□ -0.5
CCDC57-211ENST00000578187 PRRC2CQ9Y520 2896 aaKnown RBP11.95□□□□□ -0.5
CCDC57-211ENST00000578187 USP9XQ93008 2570 aaPredicted RBP11.94□□□□□ -0.5
CCDC57-211ENST00000578187 NAV2Q8IVL1 2488 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 SYNDIG1LA6NDD5 238 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 A8MUI8 341 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms