RNA–Protein interactions for RNA: ENST00000577524.5

ARHGAP28-208, Transcript of Rho GTPase activating protein 28, human

TSL 5

Gene ARHGAP28, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP28-208	ENST00000577524	TNRC6A	Q8NDV7	1962 aa	Known RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	GCN1	Q92616	2671 aa	Known RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	IGKV3D-11	A0A0A0MRZ8	115 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	MYOCOS	A0A1B0GUC4	107 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524		H0YIV9	168 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	STX16-NPEPL1	H3BU86	382 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	RTCA	O00442	366 aa	Known RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	E2F3	O00716	465 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	STX16	O14662	325 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	PRRG2	O14669	202 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	ASNA1	O43681	348 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	PEX1	O43933	1283 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	NME2P1	O60361	137 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	CDC40	O60508	579 aa	Known RBP eCLIP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	SLC19A2	O60779	497 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	LDB3	O75112	727 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	CRCP	O75575	148 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	ITGA10	O75578	1167 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	ESRRB	O95718	433 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	OTC	P00480	354 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	LDLR	P01130	860 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524		P04436	131 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	STS	P08842	583 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	FAM58BP	P0C7Q3	252 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	NR2F6	P10588	404 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	SNRPB	P14678	240 aa	Known RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	ALOX15	P16050	662 aa	Predicted RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	KRT15	P19012	456 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	CD22	P20273	847 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	NME2	P22392	152 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	PIK3R1	P27986	724 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	DEK	P35659	375 aa	Known RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	GMPR	P36959	345 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	MEOX1	P50221	254 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	ST13	P50502	369 aa	Known RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	EFNA3	P52797	238 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	ARFIP1	P53367	373 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	RPS13	P62277	151 aa	Known RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	PMP22	Q01453	160 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	ID2	Q02363	134 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	SRSF1	Q07955	248 aa	Known RBP eCLIP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	PCDH1	Q08174	1060 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	TBL3	Q12788	808 aa	Known RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	CUL3	Q13618	768 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	ZRSR2	Q15696	482 aa	Known RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	SGO1	Q5FBB7	561 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	TECRL	Q5HYJ1	363 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	OPN5	Q6U736	354 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	IL20RB	Q6UXL0	311 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	RPTN	Q6XPR3	784 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	GK5	Q6ZS86	529 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	SLC29A4	Q7RTT9	530 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	VN1R5	Q7Z5H4	357 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	CENPL	Q8N0S6	344 aa	Predicted RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	ZCCHC7	Q8N3Z6	543 aa	Known RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	CCDC63	Q8NA47	563 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	NOA1	Q8NC60	698 aa	Known RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	MDS2	Q8NDY4	140 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	HUS1B	Q8NHY5	278 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	SLC22A8	Q8TCC7	542 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	HPS1	Q92902	700 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	MTFMT	Q96DP5	389 aa	Known RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	SCMH1	Q96GD3	660 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	GPR137	Q96N19	417 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	SIGLEC12	Q96PQ1	595 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	TAAR6	Q96RI8	345 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	CSF3R	Q99062	836 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	MAPKAP1	Q9BPZ7	522 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	CNPPD1	Q9BV87	410 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	FAIM2	Q9BWQ8	316 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	EXO5	Q9H790	373 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	SEMA4B	Q9NPR2	832 aa	Predicted RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	DMRT3	Q9NQL9	472 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	PFDN4	Q9NQP4	134 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	PRDM7	Q9NQW5	492 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	XPR1	Q9UBH6	696 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	VTI1B	Q9UEU0	232 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	PSME2	Q9UL46	239 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	SNX6	Q9UNH7	406 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	STK38L	Q9Y2H1	464 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	TSC22D4	Q9Y3Q8	395 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	MED13	Q9UHV7	2174 aa		5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	SNRNP200	O75643	2136 aa	Known RBP	5.05	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	PCM1	Q15154	2024 aa		5.04	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	ASPDH	A6ND91	283 aa		5.04	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	GOLGA6L10	A6NI86	522 aa		5.04	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	CAPN14	A8MX76	684 aa		5.04	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	C4orf51	C9J302	202 aa		5.04	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	PRSS44	E7EML9	344 aa		5.04	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	WWP2	O00308	870 aa		5.04	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	FOXE1	O00358	373 aa	Predicted RBP	5.04	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	CYR61	O00622	381 aa		5.04	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	KLK8	O60259	260 aa		5.04	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	MAN1A2	O60476	641 aa		5.04	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	PRAMEF4	O60810	478 aa		5.04	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	ZG16	O60844	167 aa		5.04	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	OR2J2	O76002	312 aa		5.04	□□□□□ -1.6
ARHGAP28-208	ENST00000577524	NEURL1	O76050	574 aa		5.04	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms