RNA–Protein interactions for RNA: ENST00000577468.2

PTPRM-204, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-204ENST00000577468 TMEM41BQ5BJD5 291 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 TNFAIP8L3Q5GJ75 292 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 EARS2Q5JPH6 523 aaKnown RBP2.91□□□□□ -1.94
PTPRM-204ENST00000577468 C3orf38Q5JPI3 329 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 TMEM63BQ5T3F8 832 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 PRAMEF5Q5TYX0 476 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 ATF7IP2Q5U623 682 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 IRAK1BP1Q5VVH5 260 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 PRAMEF6Q5VXH4 476 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 ATG9BQ674R7 924 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 NADSYN1Q6IA69 706 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 VWA1Q6PCB0 445 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 DHRS4L2Q6PKH6 230 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 CLEC18BQ6UXF7 455 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 NPSR1Q6W5P4 371 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 LRRC74BQ6ZQY2 392 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 PID1Q7Z2X4 250 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 ABHD12BQ7Z5M8 362 aaPredicted RBP2.91□□□□□ -1.94
PTPRM-204ENST00000577468 LUZP2Q86TE4 346 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 AACSQ86V21 672 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 ANKRD46Q86W74 232 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 DHFR2Q86XF0 187 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 CATSPERDQ86XM0 798 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 KMT5CQ86Y97 462 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 SYT12Q8IV01 421 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 CCDC71Q8IV32 467 aaPredicted RBP2.91□□□□□ -1.94
PTPRM-204ENST00000577468 SLC35F3Q8IY50 421 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 UBQLNLQ8IYU4 475 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 MICU2Q8IYU8 434 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 CENPLQ8N0S6 344 aaPredicted RBP2.91□□□□□ -1.94
PTPRM-204ENST00000577468 GCNT2Q8N0V5 402 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 ZNF561Q8N587 486 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 FADS6Q8N9I5 356 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 ZNF610Q8N9Z0 462 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 SYT14Q8NB59 555 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 CLEC18CQ8NCF0 446 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 FBXL13Q8NEE6 735 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 OR56B1Q8NGI3 324 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 OR4A15Q8NGL6 344 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 GRPEL2Q8TAA5 225 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 ACTL9Q8TC94 416 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 GRHL3Q8TE85 626 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 KBTBD7Q8WVZ9 684 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 GAB3Q8WWW8 586 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 AP3S1Q92572 193 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 MAP4K1Q92918 833 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 C3orf49Q96BT1 292 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 FAM136AQ96C01 138 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 DGCR14Q96DF8 476 aaKnown RBP2.91□□□□□ -1.94
PTPRM-204ENST00000577468 DTD2Q96FN9 168 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 SLC35A4Q96G79 324 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 MRPL48Q96GC5 212 aaKnown RBP2.91□□□□□ -1.94
PTPRM-204ENST00000577468 ZNF668Q96K58 619 aaPredicted RBP2.91□□□□□ -1.94
PTPRM-204ENST00000577468 SNX22Q96L94 193 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 PACRGQ96M98 296 aaPredicted RBP2.91□□□□□ -1.94
PTPRM-204ENST00000577468 MBOAT7Q96N66 472 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 CASD1Q96PB1 797 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 ZNF385AQ96PM9 386 aaKnown RBP2.91□□□□□ -1.94
PTPRM-204ENST00000577468 QKIQ96PU8 341 aaKnown RBP eCLIP2.91□□□□□ -1.94
PTPRM-204ENST00000577468 SLITRK1Q96PX8 696 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 BTBD9Q96Q07 612 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 SNX18Q96RF0 628 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 PCDHB18PQ96TA0 734 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 GAD1Q99259 594 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 PRRT1Q99946 306 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 GDF15Q99988 308 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 HSD17B14Q9BPX1 270 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 FAM110AQ9BQ89 295 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 TMEM47Q9BQJ4 181 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 NEURL2Q9BR09 285 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 FDXACB1Q9BRP7 624 aaPredicted RBP2.91□□□□□ -1.94
PTPRM-204ENST00000577468 TMEM79Q9BSE2 394 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 C17orf80Q9BSJ5 609 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 NAT9Q9BTE0 207 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 MED10Q9BTT4 135 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 TEX101Q9BY14 249 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 MRPL13Q9BYD1 178 aaKnown RBP2.91□□□□□ -1.94
PTPRM-204ENST00000577468 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 ANKRD60Q9BZ19 345 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 OR51M1Q9H341 326 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 SMOC2Q9H3U7 446 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 DPEP2Q9H4A9 486 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 NXF3Q9H4D5 531 aaKnown RBP2.91□□□□□ -1.94
PTPRM-204ENST00000577468 MTG2Q9H4K7 406 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 PCIF1Q9H4Z3 704 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 RANBP3Q9H6Z4 567 aaPredicted RBP2.91□□□□□ -1.94
PTPRM-204ENST00000577468 MAGEF1Q9HAY2 307 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 PLGRKTQ9HBL7 147 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 GLOD4Q9HC38 313 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 MCCC2Q9HCC0 563 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 RAVER2Q9HCJ3 691 aaKnown RBP2.91□□□□□ -1.94
PTPRM-204ENST00000577468 CD209Q9NNX6 404 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 CHST11Q9NPF2 352 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 SACM1LQ9NTJ5 587 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 GTSE1Q9NYZ3 720 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 ERAP1Q9NZ08 941 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 AHSPQ9NZD4 102 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 SPG21Q9NZD8 308 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 MTCH1Q9NZJ7 389 aa2.91□□□□□ -1.94
PTPRM-204ENST00000577468 COL20A1Q9P218 1284 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms