RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 NPLQ9BXD5 320 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 TRIM54Q9BYV2 358 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 PELI2Q9HAT8 420 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 PROK2Q9HC23 129 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 ZFP64Q9NPA5 681 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 ACKR4Q9NPB9 350 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 BEX4Q9NWD9 120 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 TAS2R13Q9NYV9 303 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 FOXD3Q9UJU5 478 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 PCDHGB3Q9Y5G1 929 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 CUBNO60494 3623 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 C15orf38-AP3S2A0A0A6YYH1 394 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 B3GALT2O43825 422 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 LDB3O75112 727 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 LRATO95237 230 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 TBX6O95947 436 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 IL2RAP01589 272 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 AHSGP02765 367 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 TIMP3P35625 211 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 LIM2P55344 173 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 AP1S2P56377 157 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 IL2P60568 153 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 STXBP1P61764 594 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 KCNJ2P63252 427 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 ID2Q02363 134 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 DUSP8Q13202 625 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 ZNF791Q3KP31 576 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 ACSF3Q4G176 576 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 Q5PR19 223 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 MAATS1Q7Z4T9 603 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 KIF18BQ86Y91 864 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 P3H2Q8IVL5 708 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 LMNTD2Q8IXW0 634 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 LRRC25Q8N386 305 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 LIX1Q8N485 282 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 C2CD4AQ8NCU7 369 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 OR8K3Q8NH51 312 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 SLC2A12Q8TD20 617 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 CALML6Q8TD86 181 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 DOK4Q8TEW6 326 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 ZNF721Q8TF20 911 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 ATL1Q8WXF7 558 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 ANP32BQ92688 251 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 GAL3ST3Q96A11 431 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 COX4I2Q96KJ9 171 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 SIGLEC10Q96LC7 697 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 SERPINB12Q96P63 405 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 QRFPRQ96P65 431 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 TIMP4Q99727 224 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 BAG1Q99933 345 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 ZNF703Q9H7S9 590 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 SH2D2AQ9NP31 389 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 HOMER3Q9NSC5 361 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 DAPP1Q9UN19 280 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 MRPS33Q9Y291 106 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 MAD1L1Q9Y6D9 718 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 KCNE2Q9Y6J6 123 aa9.3□□□□□ -0.92
NPLOC4-220ENST00000576940 ARID1AO14497 2285 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 TLN2Q9Y4G6 2542 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 PABPN1LA6NDY0 278 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 TRIM64A6NGJ6 449 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 TRIM64BA6NI03 449 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 LRRC3CA6NJW4 275 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 EEF1E1-BLOC1S5C9J1V9 151 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 ARHGEF9O43307 516 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 EEF1E1O43324 174 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 TRAPPC6AO75865 159 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 ACSL3O95573 720 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 KRT14P02533 472 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 FGGP02679 453 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 MLNP12872 115 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 CERS1P27544 350 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 GDF5P43026 501 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 MAGEA6P43360 314 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 MPEG1Q2M385 716 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 C18orf21Q32NC0 220 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 BBS9Q3SYG4 887 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 ARMC3Q5W041 872 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 ADNP2Q6IQ32 1131 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 LYPD8Q6UX82 237 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 TMEM139Q8IV31 216 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 OR4N5Q8IXE1 308 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 RNF10Q8N5U6 811 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 OR14A16Q8NHC5 309 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 PAQR8Q8TEZ7 354 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 PPWD1Q96BP3 646 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 Q96MF0 132 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 RUNDC3BQ96NL0 473 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 WDR83Q9BRX9 315 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 PRDM7Q9NQW5 492 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 BOKQ9UMX3 212 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 GUCA1BQ9UMX6 200 aa9.29□□□□□ -0.92
NPLOC4-220ENST00000576940 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 HRKO00198 91 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 H2AFYO75367 372 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 C1QAP02745 245 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 C1GALT1C1LP0DN25 315 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 CTSSP25774 331 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 MTTPP55157 894 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms