RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-231	ENST00000574875	SCUBE1	Q8IWY4	988 aa		18.21	■□□□□ 0.51
ABR-231	ENST00000574875	ZNF595	Q8IYB9	648 aa		18.21	■□□□□ 0.51
ABR-231	ENST00000574875	KIF2B	Q8N4N8	673 aa		18.21	■□□□□ 0.51
ABR-231	ENST00000574875	CCDC197	Q8NCU1	140 aa		18.21	■□□□□ 0.51
ABR-231	ENST00000574875	CMTM7	Q96FZ5	175 aa		18.21	■□□□□ 0.51
ABR-231	ENST00000574875	UTP23	Q9BRU9	249 aa	Known RBP	18.21	■□□□□ 0.51
ABR-231	ENST00000574875	TBCD	Q9BTW9	1192 aa		18.21	■□□□□ 0.51
ABR-231	ENST00000574875	MANSC1	Q9H8J5	431 aa		18.21	■□□□□ 0.51
ABR-231	ENST00000574875	PNO1	Q9NRX1	252 aa	Known RBP	18.21	■□□□□ 0.51
ABR-231	ENST00000574875	FGFR1OP2	Q9NVK5	253 aa		18.21	■□□□□ 0.51
ABR-231	ENST00000574875	ZNF358	Q9NW07	568 aa		18.21	■□□□□ 0.51
ABR-231	ENST00000574875	CPSF2	Q9P2I0	782 aa	Known RBP	18.21	■□□□□ 0.51
ABR-231	ENST00000574875	ADGRE2	Q9UHX3	823 aa		18.21	■□□□□ 0.51
ABR-231	ENST00000574875	TNPO3	Q9Y5L0	923 aa	Known RBP	18.21	■□□□□ 0.51
ABR-231	ENST00000574875	PTPN13	Q12923	2485 aa		18.21	■□□□□ 0.5
ABR-231	ENST00000574875	LRRK2	Q5S007	2527 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	LRRC14B	A6NHZ5	514 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	CYR61	O00622	381 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	E2F3	O00716	465 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	SH3BGRL	O75368	114 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	RBP1	P09455	135 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	SERPINB1	P30740	379 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	ST13	P50502	369 aa	Known RBP	18.2	■□□□□ 0.5
ABR-231	ENST00000574875	HNRNPF	P52597	415 aa	Known RBP	18.2	■□□□□ 0.5
ABR-231	ENST00000574875	AP5B1	Q2VPB7	878 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	ZNF766	Q5HY98	468 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	LIPJ	Q5W064	366 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	ZNF324B	Q6AW86	544 aa	Predicted RBP	18.2	■□□□□ 0.5
ABR-231	ENST00000574875	MYLK4	Q86YV6	388 aa	Predicted RBP	18.2	■□□□□ 0.5
ABR-231	ENST00000574875	LGI4	Q8N135	537 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	FAM47B	Q8NA70	645 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	TMEM52	Q8NDY8	209 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	DNAJB8	Q8NHS0	232 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	SLX1A	Q9BQ83	275 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	ANKRD10	Q9NXR5	420 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	KCMF1	Q9P0J7	381 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	SLC5A6	Q9Y289	635 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	HIVEP3	Q5T1R4	2406 aa		18.2	■□□□□ 0.5
ABR-231	ENST00000574875	USP9X	Q93008	2570 aa	Predicted RBP	18.19	■□□□□ 0.5
ABR-231	ENST00000574875	GABRR3	A8MPY1	467 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	RTCA	O00442	366 aa	Known RBP	18.19	■□□□□ 0.5
ABR-231	ENST00000574875	SNX3	O60493	162 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	PLIN3	O60664	434 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	EDF1	O60869	148 aa	Known RBP	18.19	■□□□□ 0.5
ABR-231	ENST00000574875	CTNS	O60931	367 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	DDAH2	O95865	285 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	CRYAB	P02511	175 aa	Known RBP	18.19	■□□□□ 0.5
ABR-231	ENST00000574875	BPGM	P07738	259 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	GP1BB	P13224	206 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	ATP5A1	P25705	553 aa	Known RBP	18.19	■□□□□ 0.5
ABR-231	ENST00000574875	OC90	Q02509	493 aa	Predicted RBP	18.19	■□□□□ 0.5
ABR-231	ENST00000574875	GTF2H2	Q13888	395 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	TSNAXIP1	Q2TAA8	658 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	TECRL	Q5HYJ1	363 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	DEPDC1	Q5TB30	811 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	GTF2H2C	Q6P1K8	395 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	METTL2B	Q6P1Q9	378 aa	Known RBP	18.19	■□□□□ 0.5
ABR-231	ENST00000574875	NUDCD3	Q8IVD9	361 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	ACOT4	Q8N9L9	421 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	B3GNT7	Q8NFL0	401 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	HUS1B	Q8NHY5	278 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	SREK1	Q8WXA9	508 aa	Known RBP	18.19	■□□□□ 0.5
ABR-231	ENST00000574875	SCYL1	Q96KG9	808 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	SIGLEC12	Q96PQ1	595 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	DEFB126	Q9BYW3	111 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	OR51B5	Q9H339	312 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	IPPK	Q9H8X2	491 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	ACTR8	Q9H981	624 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	LYRM4	Q9HD34	91 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	ERRFI1	Q9UJM3	462 aa	Predicted RBP	18.19	■□□□□ 0.5
ABR-231	ENST00000574875	PCDHGB6	Q9Y5F9	930 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	PCDHGA11	Q9Y5H2	935 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	CLDN16	Q9Y5I7	305 aa		18.19	■□□□□ 0.5
ABR-231	ENST00000574875	POLE	Q07864	2286 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	TGFBR3L	H3BV60	316 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	SAP18	O00422	153 aa	Known RBP	18.18	■□□□□ 0.5
ABR-231	ENST00000574875	CDK2AP1	O14519	115 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	MYO1D	O94832	1006 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	SIX3	O95343	332 aa	Predicted RBP	18.18	■□□□□ 0.5
ABR-231	ENST00000574875	PROC	P04070	461 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	PIK3CB	P42338	1070 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	PIK3CG	P48736	1102 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	DDX39B	Q13838	428 aa	Known RBP	18.18	■□□□□ 0.5
ABR-231	ENST00000574875	OR1C1	Q15619	314 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	KHDRBS2	Q5VWX1	349 aa	Known RBP	18.18	■□□□□ 0.5
ABR-231	ENST00000574875	SPINK14	Q6IE38	97 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	OR4C11	Q6IEV9	310 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	ZNF793	Q6ZN11	406 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	SPATA21	Q7Z572	469 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	GOLGA7	Q7Z5G4	137 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	CLNK	Q7Z7G1	428 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	HORMAD2	Q8N7B1	307 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	CCDC63	Q8NA47	563 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	MDS2	Q8NDY4	140 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	RDH11	Q8TC12	318 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	NR4A3	Q92570	626 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	CSF3R	Q99062	836 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	MAPKAP1	Q9BPZ7	522 aa		18.18	■□□□□ 0.5
ABR-231	ENST00000574875	ELAC2	Q9BQ52	826 aa	Known RBP	18.18	■□□□□ 0.5
ABR-231	ENST00000574875	C12orf65	Q9H3J6	166 aa	Known RBP	18.18	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms