RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-215	ENST00000572905	GPX3	P22352	226 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	NUMB	P49757	651 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	BACE1	P56817	501 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	DHODH	Q02127	395 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	MTF1	Q14872	753 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	MTHFSD	Q2M296	383 aa	Known RBP	4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	KRTAP24-1	Q3LI83	254 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	OR6B2	Q6IFH4	312 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	OLFM4	Q6UX06	510 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	KIF6	Q6ZMV9	814 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	WDR88	Q6ZMY6	472 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	FRRS1	Q6ZNA5	592 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	ADCK1	Q86TW2	530 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	KLHDC8B	Q8IXV7	354 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	OR4L1	Q8NH43	312 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	TAF4B	Q92750	862 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	C14orf79	Q96F83	325 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	CXorf58	Q96LI9	332 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	LITAF	Q99732	161 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	ASCL2	Q99929	193 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	OVOL2	Q9BRP0	275 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	RBM4	Q9BWF3	364 aa	Known RBP	4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	FUNDC2	Q9BWH2	189 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	PINK1	Q9BXM7	581 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	SLC26A1	Q9H2B4	701 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	COPS7A	Q9UBW8	275 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	WIPI2	Q9Y4P8	454 aa		4.37	□□□□□ -1.71
TOM1L1-215	ENST00000572905	TXNL1	O43396	289 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	EDIL3	O43854	480 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	CSDE1	O75534	798 aa	Known RBP	4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	TXNDC12	O95881	172 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	TGFA	P01135	160 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	APRT	P07741	180 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	PRKACG	P22612	351 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	GLRA1	P23415	457 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	EDNRA	P25101	427 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	SLC6A12	P48065	614 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	FHIT	P49789	147 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	HILS1	P60008	231 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	TRADD	Q15628	312 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	TMEM30B	Q3MIR4	351 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	ZFP69	Q49AA0	526 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	EPC2	Q52LR7	807 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	GPAT3	Q53EU6	434 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	TAF1B	Q53T94	588 aa	Predicted RBP	4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	HIST2H2AA3	Q6FI13	130 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	RTL6	Q6ICC9	239 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	CDHR3	Q6ZTQ4	885 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	COLGALT1	Q8NBJ5	622 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	SLCO2A1	Q92959	643 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	ESAM	Q96AP7	390 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	MRPL53	Q96EL3	112 aa	Known RBP	4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	SAMD8	Q96LT4	415 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	COQ7	Q99807	217 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	SYT15	Q9BQS2	421 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	B3GAT2	Q9NPZ5	323 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	SPHK2	Q9NRA0	654 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	TEX10	Q9NXF1	929 aa	Predicted RBP	4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	TECR	Q9NZ01	308 aa	Known RBP	4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	VPS54	Q9P1Q0	977 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	PLA2G4C	Q9UP65	541 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	GAB2	Q9UQC2	676 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	PLEKHA6	Q9Y2H5	1048 aa		4.36	□□□□□ -1.71
TOM1L1-215	ENST00000572905	PRR23A	A6NEV1	266 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	SHISA7	A6NL88	538 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	ANHX	E9PGG2	379 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	NPIPB9	F8W1W9	429 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905		K7EQD1	137 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	ARPC1B	O15143	372 aa	Known RBP	4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	INPP4B	O15327	924 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	TNFSF12	O43508	249 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	TLX2	O43763	284 aa	Predicted RBP	4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	KIAA0513	O60268	411 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	LRP3	O75074	770 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	OR6B1	O95007	311 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	TRIM16	O95361	564 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	SYNGR4	O95473	234 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	GHR	P10912	638 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	ZNF26	P17031	533 aa	Predicted RBP	4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	CAMLG	P49069	296 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	CDKL1	Q00532	357 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	EXOSC7	Q15024	291 aa	Known RBP	4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	INA	Q16352	499 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	WSCD2	Q2TBF2	565 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	FASTKD1	Q53R41	847 aa	Known RBP	4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	DDI2	Q5TDH0	399 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	C12orf60	Q5U649	245 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905		Q6ZRP5	223 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	NOTCH2NL	Q7Z3S9	236 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	NUP37	Q8NFH4	326 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	OR10G7	Q8NGN6	311 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	OR6F1	Q8NGZ6	308 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	ZNF519	Q8TB69	540 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	HCAR2	Q8TDS4	363 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	TCP11	Q8WWU5	503 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	LIPH	Q8WWY8	451 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	HIST1H2AC	Q93077	130 aa		4.35	□□□□□ -1.71
TOM1L1-215	ENST00000572905	PCED1B	Q96HM7	432 aa		4.35	□□□□□ -1.71

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