RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 TRAF3Q13114 568 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 SERTAD2Q14140 314 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 C1QL3Q5VWW1 255 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 TIFABQ6ZNK6 161 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 TMEM151AQ8N4L1 468 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 TMEM156Q8N614 296 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 OR4F6Q8NGB9 312 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 DNAJB8Q8NHS0 232 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 DAZLQ92904 295 aaKnown RBP16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 PPWD1Q96BP3 646 aaKnown RBP16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 ZNF717Q9BY31 904 aaPredicted RBP16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 RPF2Q9H7B2 306 aaKnown RBP16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 VTI1BQ9UEU0 232 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 PLEKHB1Q9UF11 243 aaPredicted RBP16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 TSC22D4Q9Y3Q8 395 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 ARHGAP10A1A4S6 786 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 FOXO6A8MYZ6 492 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 WWP2O00308 870 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 LDLRP01130 860 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 SHBGP04278 402 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 BSGP35613 385 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 HLCSP50747 726 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 FOLH1Q04609 750 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 IFT88Q13099 833 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 C4orf17Q53FE4 359 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 FRG2Q64ET8 278 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 CYP20A1Q6UW02 462 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 FJX1Q86VR8 437 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 ZNF227Q86WZ6 799 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 ZCCHC7Q8N3Z6 543 aaKnown RBP16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 OR14A16Q8NHC5 309 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 SLC2A12Q8TD20 617 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 TRPC4APQ8TEL6 797 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 ZNF483Q8TF39 744 aaPredicted RBP16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 UBLCP1Q8WVY7 318 aaPredicted RBP16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 UCN3Q969E3 161 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 TMEM125Q96AQ2 219 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 DGAT2Q96PD7 388 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 FRG2BQ96QU4 278 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 NTMT1Q9BV86 223 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 FARSBQ9NSD9 589 aaKnown RBP16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 MS4A12Q9NXJ0 267 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 PSMC3IPQ9P2W1 217 aaPredicted RBP16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 PHF11Q9UIL8 331 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 SH3BGRL2Q9UJC5 107 aa16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 PPIEQ9UNP9 301 aaKnown RBP16.55■□□□□ 0.24
CTDNEP1-207ENST00000572043 A0A0A6YYD5 115 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 A0A1W2PR48 441 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 SMIM23A6NLE4 172 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 NPIPA5E9PKD4 350 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 FOXE1O00358 373 aaPredicted RBP16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 OR2J2O76002 312 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 DDAH2O95865 285 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 FAM58BPP0C7Q3 252 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 PYGBP11216 843 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 TAC1P20366 129 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 TLX1P31314 330 aaPredicted RBP16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 TRHRP34981 398 aaPredicted RBP16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 BUD31P41223 144 aaPredicted RBP16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 SLCO1A2P46721 670 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 ALDH6A1Q02252 535 aaKnown RBP16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 CUL3Q13618 768 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 LETMD1Q6P1Q0 360 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 HSDL2Q6YN16 418 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 DGAT2L6Q6ZPD8 337 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 NUDT13Q86X67 352 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 CYP4Z2PQ8N1L4 340 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 CPSF7Q8N684 471 aaKnown RBP16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 FAM98AQ8NCA5 519 aaKnown RBP16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 MORN4Q8NDC4 146 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 FRMD6Q96NE9 622 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 SERPINI1Q99574 410 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 ELOVL6Q9H5J4 265 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 NPIPA1Q9UND3 350 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 ASB4Q9Y574 426 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 PCDHGB6Q9Y5F9 930 aa16.54■□□□□ 0.24
CTDNEP1-207ENST00000572043 CPAMD8Q8IZJ3 1885 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 TRGV8A0A0C4DH27 118 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 TMEM200CA6NKL6 621 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 PROM1O43490 865 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 NME2P1O60361 137 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 DLX3O60479 287 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 SUPT7LO94864 414 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 OTCP00480 354 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 NR2F6P10588 404 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 COX7A2P14406 83 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 NME2P22392 152 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 RFC3P40938 356 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 SSR4P51571 173 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 GPR85P60893 370 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 MRM1Q6IN84 353 aaKnown RBP16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 TANKQ92844 425 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 TMEM237Q96Q45 408 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 HBEGFQ99075 208 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 MRPL1Q9BYD6 325 aaKnown RBP16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 DDX31Q9H8H2 851 aaKnown RBP16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 L2HGDHQ9H9P8 463 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 LYARQ9NX58 379 aaKnown RBP16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 SLC12A4Q9UP95 1085 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 ERVK-11Q9UQG0 969 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms