RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 HIVEP1P15822 2718 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 H0YIG0 161 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 CNOT3O75175 753 aaKnown RBP12.52□□□□□ -0.41
CCDC40-205ENST00000571028 CDC123O75794 336 aaPredicted RBP12.52□□□□□ -0.41
CCDC40-205ENST00000571028 GBAP04062 536 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 CERS1P27544 350 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 ARRB2P32121 409 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 XCR1P46094 333 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 ABCE1P61221 599 aaKnown RBP12.52□□□□□ -0.41
CCDC40-205ENST00000571028 HMGCS1Q01581 520 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 AIMP2Q13155 320 aaKnown RBP12.52□□□□□ -0.41
CCDC40-205ENST00000571028 RUNX2Q13950 521 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 DSG2Q14126 1118 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 ABRAXAS2Q15018 415 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 AP5B1Q2VPB7 878 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 HSP90B2PQ58FF3 399 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 SH2D4BQ5SQS7 431 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 AGAP7PQ5VUJ5 663 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 B3GNTL1Q67FW5 361 aaPredicted RBP12.52□□□□□ -0.41
CCDC40-205ENST00000571028 ABHD17CQ6PCB6 329 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 BNC2Q6ZN30 1099 aaPredicted RBP12.52□□□□□ -0.41
CCDC40-205ENST00000571028 UBE3DQ7Z6J8 389 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 AFAP1L2Q8N4X5 818 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 BCORP1Q8N888 145 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 OR51Q1Q8NH59 317 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 STT3BQ8TCJ2 826 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 DYDC1Q8WWB3 177 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 RGMAQ96B86 450 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 SEC16BQ96JE7 1060 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 AGAP4Q96P64 663 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 SERPINI1Q99574 410 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 TRMOQ9BU70 441 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 MRPL1Q9BYD6 325 aaKnown RBP12.52□□□□□ -0.41
CCDC40-205ENST00000571028 EPS8L2Q9H6S3 715 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 CSAG2Q9Y5P2 127 aa12.52□□□□□ -0.41
CCDC40-205ENST00000571028 A0A088AWK7 358 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 OR2W5A6NFC9 320 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 TMEM233B4DJY2 109 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 FAM227AF5H4B4 570 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 FOXE1O00358 373 aaPredicted RBP12.51□□□□□ -0.41
CCDC40-205ENST00000571028 AZIN1O14977 448 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 B3GALT2O43825 422 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 KLF7O75840 302 aaPredicted RBP12.51□□□□□ -0.41
CCDC40-205ENST00000571028 ZGLP1P0C6A0 271 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 SMIM10L1P0DMW3 83 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 UROSP10746 265 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 ZNF10P21506 573 aaPredicted RBP12.51□□□□□ -0.41
CCDC40-205ENST00000571028 SSTR2P30874 369 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 SLC1A6P48664 564 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 MTTPP55157 894 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 PPP2R2AP63151 447 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 SKP1P63208 163 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 TLR1Q15399 786 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 NKG7Q16617 165 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 IMPG1Q17R60 797 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 ADPRMQ3LIE5 342 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 MINDY4Q4G0A6 757 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 TMEM35AQ53FP2 167 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 SPDYAQ5MJ70 313 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 OR4C11Q6IEV9 310 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 MRPL14Q6P1L8 145 aaKnown RBP12.51□□□□□ -0.41
CCDC40-205ENST00000571028 MTFR2Q6P444 385 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 ZNF793Q6ZN11 406 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 MRGPRGQ86SM5 289 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 LAPTM4BQ86VI4 370 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 DDIASQ8IXT1 998 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 SRFBP1Q8NEF9 429 aaKnown RBP12.51□□□□□ -0.41
CCDC40-205ENST00000571028 ITLN2Q8WWU7 325 aaPredicted RBP12.51□□□□□ -0.41
CCDC40-205ENST00000571028 RELTQ969Z4 430 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 FKBP10Q96AY3 582 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 POM121Q96HA1 1249 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 SMIM10Q96HG1 83 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 QRFPRQ96P65 431 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 KCNC2Q96PR1 638 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 TBCDQ9BTW9 1192 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 MKKSQ9NPJ1 570 aaPredicted RBP12.51□□□□□ -0.41
CCDC40-205ENST00000571028 PRDM7Q9NQW5 492 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 FBXW2Q9UKT8 454 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 TRAF6Q9Y4K3 522 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 PTGDR2Q9Y5Y4 395 aa12.51□□□□□ -0.41
CCDC40-205ENST00000571028 SCN3AQ9NY46 2000 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 TRGV8A0A0C4DH27 118 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 TMEM114B3SHH9 223 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 H3BQF6 201 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 MASP2O00187 686 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 PSMD12O00232 456 aaPredicted RBP12.5□□□□□ -0.41
CCDC40-205ENST00000571028 PLPP1O14494 284 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 B4GALT2O60909 372 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 EEDO75530 441 aaKnown RBP12.5□□□□□ -0.41
CCDC40-205ENST00000571028 SKAP2O75563 359 aaPredicted RBP12.5□□□□□ -0.41
CCDC40-205ENST00000571028 CHEK2O96017 543 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 HEXBP07686 556 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 LINC00032P0C843 101 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 ATP5A1P25705 553 aaKnown RBP12.5□□□□□ -0.41
CCDC40-205ENST00000571028 SLC18A1P54219 525 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 SOX8P57073 446 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 KLC1Q07866 573 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 BST1Q10588 318 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 SLAMF1Q13291 335 aa12.5□□□□□ -0.41
CCDC40-205ENST00000571028 ZNF630Q2M218 657 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 599.5 ms