RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 MAPKAP1Q9BPZ7 522 aa8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 LRRC1Q9BTT6 524 aa8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 TSPYL1Q9H0U9 437 aa8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 VPS11Q9H270 941 aa8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 OR51B5Q9H339 312 aa8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 LIN28AQ9H9Z2 209 aaKnown RBP8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 WDR41Q9HAD4 459 aa8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 SNX15Q9NRS6 342 aa8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 IGSF5Q9NSI5 407 aa8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 MS4A12Q9NXJ0 267 aa8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 MYOTQ9UBF9 498 aa8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 PHF11Q9UIL8 331 aa8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 PPT2Q9UMR5 302 aa8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 PPIEQ9UNP9 301 aaKnown RBP8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 ZNF835Q9Y2P0 537 aa8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 MEMO1Q9Y316 297 aa8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 PCDHGA11Q9Y5H2 935 aa8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 TNPO3Q9Y5L0 923 aaKnown RBP8.31□□□□□ -1.08
NPLOC4-204ENST00000570324 DOPEY1Q5JWR5 2465 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 A0A1B0GTH9 108 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 CCDC189A1A4V9 331 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 E9PLN8 166 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 ZNHIT1O43257 154 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 PRKNO60260 465 aaPredicted RBP8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 OR10H2O60403 315 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 PDE9AO76083 593 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 KLHL2O95198 593 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 TBX6O95947 436 aaPredicted RBP8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 C1QAP02745 245 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 P04436 131 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 INHBAP08476 426 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 AGAP20933 346 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 PTX3P26022 381 aaPredicted RBP8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 GRNP28799 593 aaKnown RBP8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 PTGER1P34995 402 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 SOX3P41225 446 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 PIK3CBP42338 1070 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 GPR143P51810 404 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 ALDH18A1P54886 795 aaKnown RBP8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 RNF4P78317 190 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 ADORA2A-AS1P86434 159 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 IRF9Q00978 393 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 PLIN5Q00G26 463 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 ID2Q02363 134 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 GTF2H2Q13888 395 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 SETDB1Q15047 1291 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 RNFT1Q5M7Z0 435 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 DEPDC1Q5TB30 811 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 LIPJQ5W064 366 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 TTC19Q6DKK2 380 aaPredicted RBP8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 TMEM211Q6ICI0 200 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 GTF2H2CQ6P1K8 395 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 OPN5Q6U736 354 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 C3P1Q6ZMU1 363 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 ZNF793Q6ZN11 406 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 C16orf47Q6ZP98 133 aaPredicted RBP8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 RTL4Q6ZR62 310 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 GK5Q6ZS86 529 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 GDF7Q7Z4P5 450 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 MDGA2Q7Z553 956 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 GPR180Q86V85 440 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 ZNF227Q86WZ6 799 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 DOLPP1Q86YN1 238 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 TICAM1Q8IUC6 712 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 SIAH3Q8IW03 269 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 OR4N5Q8IXE1 308 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 SLC2A12Q8TD20 617 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 CA5BP1Q8WTZ4 195 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 PTPMT1Q8WUK0 201 aaPredicted RBP8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 IFT81Q8WYA0 676 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 MTFMTQ96DP5 389 aaKnown RBP8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 SCYL1Q96KG9 808 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 RASL10BQ96S79 203 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 MTERF1Q99551 399 aaKnown RBP8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 VKORC1Q9BQB6 163 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 DEFB127Q9H1M4 99 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 RPF2Q9H7B2 306 aaKnown RBP8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 IPPKQ9H8X2 491 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.3□□□□□ -1.082e-6■■■□□ 16.1
NPLOC4-204ENST00000570324 ZNF223Q9UK11 482 aaPredicted RBP8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 ASB1Q9Y576 335 aa8.3□□□□□ -1.08
NPLOC4-204ENST00000570324 IQANK1A0A1B0GTG1 560 aa8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 SMIM24O75264 130 aa8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 OR6B1O95007 311 aa8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 CLDN9O95484 217 aa8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 RBP1P09455 135 aa8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 CNR1P21554 472 aa8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 TNFRSF8P28908 595 aa8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 PTGER4P35408 488 aa8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 STT3AP46977 705 aa8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 CCNG1P51959 295 aa8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 HK2P52789 917 aa8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 RPS13P62277 151 aaKnown RBP8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 PPIAP62937 165 aaKnown RBP8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 CPSF6Q16630 551 aaKnown RBP eCLIP8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 WHAMMP3Q1A5X7 153 aa8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 ZNF750Q32MQ0 723 aa8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 ARHGAP11AQ6P4F7 1023 aa8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 RGS9BPQ6ZS82 235 aa8.29□□□□□ -1.08
NPLOC4-204ENST00000570324 FAM47EQ6ZV65 393 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms