RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 PGRMC2O15173 223 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 PDPK1O15530 556 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 ITGAXP20702 1163 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 XCR1P46094 333 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 NUDT2P50583 147 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 TARDBPQ13148 414 aaKnown RBP eCLIP14.54□□□□□ -0.082e-7■■■□□ 14.9
HERPUD1-219ENST00000570273 SPRED3Q2MJR0 410 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 COQ5Q5HYK3 327 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 ANXA8L1Q5VT79 327 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 SLC48A1Q6P1K1 146 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 SLC2A7Q6PXP3 512 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 MSANTD1Q6ZTZ1 278 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 RETREG3Q86VR2 466 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 TMPRSS12Q86WS5 348 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 SHISA5Q8N114 240 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 OR51Q1Q8NH59 317 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 CIDECQ96AQ7 238 aaPredicted RBP14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 COQ8BQ96D53 544 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 GBP5Q96PP8 586 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 TAAR9Q96RI9 348 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 ULBP3Q9BZM4 244 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 RMND5AQ9H871 391 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 GIMAP4Q9NUV9 329 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 TRPC4Q9UBN4 977 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 ENTPD4Q9Y227 616 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 MRPS33Q9Y291 106 aaKnown RBP14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 MAP4K5Q9Y4K4 846 aa14.54□□□□□ -0.08
HERPUD1-219ENST00000570273 SPTBP11277 2137 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 FAM227AF5H4B4 570 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 CYR61O00622 381 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 HNRNPCL1O60812 293 aaKnown RBP14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 ERAL1O75616 437 aaKnown RBP14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 ATP5HO75947 161 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 UNC5CO95185 931 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 ZNF28P17035 718 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 EFNA1P20827 205 aaPredicted RBP14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 SDHBP21912 280 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 NTSP30990 170 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 HNRNPFP52597 415 aaKnown RBP14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 PHC1P78364 1004 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 PLIN5Q00G26 463 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 TLR1Q15399 786 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 MAPKAPK3Q16644 382 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 PRSS53Q2L4Q9 553 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 C6orf10Q5SRN2 563 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 ANKRD46Q86W74 232 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 CACTIN-AS1Q8N1I8 211 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 PCYOX1LQ8NBM8 494 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 SLC38A9Q8NBW4 561 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 TMEM52Q8NDY8 209 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 VPS37AQ8NEZ2 397 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 TBC1D20Q96BZ9 403 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 ZPBPQ9BS86 351 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 DDA1Q9BW61 102 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 EFCAB1Q9HAE3 211 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 SLC35C2Q9NQQ7 365 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 PRDM9Q9NQV7 894 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 CES1P1Q9UKY3 287 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 SATB2Q9UPW6 733 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 B3GALT1Q9Y5Z6 326 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 SCN3AQ9NY46 2000 aa14.53□□□□□ -0.08
HERPUD1-219ENST00000570273 A0A1W2PNU3 283 aaPredicted RBP14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 BLACEA4D250 179 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 FAM149AA5PLN7 773 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 WASHC1A8K0Z3 465 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 B2RBV5 119 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 B4GALT2O60909 372 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 FHP07954 510 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 WNT3P56703 355 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 DCDP81605 110 aaKnown RBP14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 ABHD18Q0P651 414 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 ART3Q13508 389 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 NFYCQ13952 458 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 MPEG1Q2M385 716 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 NKAIN1Q4KMZ8 207 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 PAGE3Q5JUK9 113 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 FAM180BQ6P0A1 224 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 DNAJC14Q6Y2X3 702 aaPredicted RBP14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 YTHDF3Q7Z739 585 aaKnown RBP14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 DHDDSQ86SQ9 333 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 NATD1Q8N6N6 113 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 DNAJB14Q8TBM8 379 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 ADAMTS14Q8WXS8 1223 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 ITCHQ96J02 903 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 BBS4Q96RK4 519 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 ASPSCR1Q9BZE9 553 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 IL1RL2Q9HB29 575 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 TAS2R7Q9NYW3 318 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 PSME2Q9UL46 239 aa14.52□□□□□ -0.08
HERPUD1-219ENST00000570273 SPEGQ15772 3267 aa14.52□□□□□ -0.09
HERPUD1-219ENST00000570273 CACNA1AO00555 2505 aa14.52□□□□□ -0.09
HERPUD1-219ENST00000570273 RNASET2O00584 256 aaKnown RBP14.51□□□□□ -0.09
HERPUD1-219ENST00000570273 CDC123O75794 336 aaPredicted RBP14.51□□□□□ -0.09
HERPUD1-219ENST00000570273 CPSF4O95639 269 aaKnown RBP14.51□□□□□ -0.09
HERPUD1-219ENST00000570273 RORAP35398 523 aa14.51□□□□□ -0.09
HERPUD1-219ENST00000570273 NCALDP61601 193 aa14.51□□□□□ -0.09
HERPUD1-219ENST00000570273 ID2Q02363 134 aa14.51□□□□□ -0.09
HERPUD1-219ENST00000570273 ERV3-1Q14264 604 aa14.51□□□□□ -0.09
HERPUD1-219ENST00000570273 TRMT5Q32P41 509 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms