RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 RTCAO00442 366 aaKnown RBP15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 CCL21O00585 134 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 PLPP1O14494 284 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 STX16O14662 325 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 PRKNO60260 465 aaPredicted RBP15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 RBP1P09455 135 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 PCNAP12004 261 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 PTX3P26022 381 aaPredicted RBP15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 PHEXP78562 749 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 GTF2H2Q13888 395 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 TSNAXIP1Q2TAA8 658 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 UBAP2Q5T6F2 1119 aaKnown RBP15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 MRM1Q6IN84 353 aaKnown RBP15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 GTF2H2CQ6P1K8 395 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 XKRXQ6PP77 449 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 HSDL2Q6YN16 418 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 TAOK1Q7L7X3 1001 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 GOLGA7Q7Z5G4 137 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 CPSF7Q8N684 471 aaKnown RBP15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 NOA1Q8NC60 698 aaKnown RBP15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 WDR20Q8TBZ3 569 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 TANKQ92844 425 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 PAFAH2Q99487 392 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 ACTR8Q9H981 624 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 ANGPTL3Q9Y5C1 460 aa15.88■□□□□ 0.13
MAP1LC3B-208ENST00000570189 C17orf105B2RV13 164 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 NPIPA5E9PKD4 350 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 KIF2AO00139 706 aaPredicted RBP15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 SEMA3DO95025 777 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 IFNA16P05015 189 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 INHBAP08476 426 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 CPN2P22792 545 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 STT3AP46977 705 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 ST13P50502 369 aaKnown RBP15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 TNFRSF17Q02223 184 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 C3AR1Q16581 482 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 GPR180Q86V85 440 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 SULF2Q8IWU5 870 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 PLD6Q8N2A8 252 aaKnown RBP15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 SLC2A12Q8TD20 617 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 PHF10Q8WUB8 498 aaKnown RBP15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 RASL10BQ96S79 203 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 NTMT1Q9BV86 223 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 OR51B5Q9H339 312 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 DDX31Q9H8H2 851 aaKnown RBP15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 IPPKQ9H8X2 491 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 TIMMDC1Q9NPL8 285 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 LYARQ9NX58 379 aaKnown RBP15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 NPIPA1Q9UND3 350 aa15.87■□□□□ 0.13
MAP1LC3B-208ENST00000570189 A0A0A6YYD5 115 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 HNRNPRO43390 633 aaKnown RBP15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 PROM1O43490 865 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 PEX1O43933 1283 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 FGF17O60258 216 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 LDB3O75112 727 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 OR2J2O76002 312 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 KRT38O76015 456 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 IGKV3-11P04433 115 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 CTAGE8P0CG41 777 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 COX7A2P14406 83 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 GALNSP34059 522 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 BSGP35613 385 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 MEOX1P50221 254 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 RAP1GDS1P52306 607 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 HK2P52789 917 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 RNF4P78317 190 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 SRSF11Q05519 484 aaKnown RBP15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 SLAMF1Q13291 335 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 UAP1Q16222 522 aaPredicted RBP15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 MPEG1Q2M385 716 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 GGTA1PQ4G0N0 100 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 MDGA2Q7Z553 956 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 CTAGE4Q8IX94 777 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 CNPY4Q8N129 248 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 GOLM1Q8NBJ4 401 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 PSD4Q8NDX1 1056 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 OR5L2Q8NGL0 311 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 NUBPLQ8TB37 319 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 ZNF721Q8TF20 911 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 MTERF1Q99551 399 aaKnown RBP15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 PELOQ9BRX2 385 aaKnown RBP15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 C1QTNF3Q9BXJ4 246 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 RPF2Q9H7B2 306 aaKnown RBP15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 MEMO1Q9Y316 297 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 DNAJC13O75165 2243 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 ZNF407Q9C0G0 2248 aa15.86■□□□□ 0.13
MAP1LC3B-208ENST00000570189 PHF3Q92576 2039 aaKnown RBP15.85■□□□□ 0.13
MAP1LC3B-208ENST00000570189 A8MVJ9 347 aa15.85■□□□□ 0.13
MAP1LC3B-208ENST00000570189 SIX3O95343 332 aaPredicted RBP15.85■□□□□ 0.13
MAP1LC3B-208ENST00000570189 CLDN9O95484 217 aa15.85■□□□□ 0.13
MAP1LC3B-208ENST00000570189 ACSL3O95573 720 aa15.85■□□□□ 0.13
MAP1LC3B-208ENST00000570189 ABHD2P08910 425 aa15.85■□□□□ 0.13
MAP1LC3B-208ENST00000570189 TLX1P31314 330 aaPredicted RBP15.85■□□□□ 0.13
MAP1LC3B-208ENST00000570189 BUD31P41223 144 aaPredicted RBP15.85■□□□□ 0.13
MAP1LC3B-208ENST00000570189 RPS13P62277 151 aaKnown RBP15.85■□□□□ 0.13
MAP1LC3B-208ENST00000570189 ADORA2A-AS1P86434 159 aa15.85■□□□□ 0.13
MAP1LC3B-208ENST00000570189 PLIN5Q00G26 463 aa15.85■□□□□ 0.13
MAP1LC3B-208ENST00000570189 SPRED3Q2MJR0 410 aa15.85■□□□□ 0.13
MAP1LC3B-208ENST00000570189 RGS9BPQ6ZS82 235 aa15.85■□□□□ 0.13
MAP1LC3B-208ENST00000570189 MRGPRGQ86SM5 289 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms