RNA–Protein interactions for RNA: ENST00000569950.1

VPS35-211, Transcript of VPS35, retromer complex component, humanhuman

TSL 5

Gene VPS35, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-211ENST00000569950 NAF1Q96HR8 494 aaKnown RBP8.73□□□□□ -1.01
VPS35-211ENST00000569950 TEX37Q96LM6 180 aa8.73□□□□□ -1.01
VPS35-211ENST00000569950 PPP3R2Q96LZ3 170 aa8.73□□□□□ -1.01
VPS35-211ENST00000569950 ZNF681Q96N22 645 aa8.73□□□□□ -1.01
VPS35-211ENST00000569950 CCT7Q99832 543 aa8.73□□□□□ -1.01
VPS35-211ENST00000569950 GPR87Q9BY21 358 aa8.73□□□□□ -1.01
VPS35-211ENST00000569950 FAM117AQ9C073 453 aa8.73□□□□□ -1.01
VPS35-211ENST00000569950 ROGDIQ9GZN7 287 aa8.73□□□□□ -1.01
VPS35-211ENST00000569950 MYNNQ9NPC7 610 aa8.73□□□□□ -1.01
VPS35-211ENST00000569950 LYARQ9NX58 379 aaKnown RBP8.73□□□□□ -1.01
VPS35-211ENST00000569950 C5AR2Q9P296 337 aa8.73□□□□□ -1.01
VPS35-211ENST00000569950 BAIAP2L1Q9UHR4 511 aa8.73□□□□□ -1.01
VPS35-211ENST00000569950 FBXW2Q9UKT8 454 aa8.73□□□□□ -1.01
VPS35-211ENST00000569950 ERVK-11Q9UQG0 969 aa8.73□□□□□ -1.01
VPS35-211ENST00000569950 FARSAQ9Y285 508 aaKnown RBP8.73□□□□□ -1.01
VPS35-211ENST00000569950 PCDHA9Q9Y5H5 950 aa8.73□□□□□ -1.01
VPS35-211ENST00000569950 GPR45Q9Y5Y3 372 aa8.73□□□□□ -1.01
VPS35-211ENST00000569950 PRRC2CQ9Y520 2896 aaKnown RBP8.73□□□□□ -1.01
VPS35-211ENST00000569950 KALRNO60229 2985 aa8.73□□□□□ -1.01
VPS35-211ENST00000569950 TCRBV16S1A1N1A0A5B0 115 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 GLOD5A6NK44 160 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 SLCO1B7G3V0H7 640 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 MASP2O00187 686 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 POLR3GO15318 223 aaPredicted RBP8.72□□□□□ -1.01
VPS35-211ENST00000569950 NKX2-8O15522 239 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 B4GALT2O60909 372 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 LDB3O75112 727 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 CREG1O75629 220 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 CDC123O75794 336 aaPredicted RBP8.72□□□□□ -1.01
VPS35-211ENST00000569950 CHEK2O96017 543 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 CCNYL3P0C7X3 344 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 G6PDP11413 515 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 AGXTP21549 392 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 IL12AP29459 219 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 MRPL19P49406 292 aaKnown RBP8.72□□□□□ -1.01
VPS35-211ENST00000569950 MAPK12P53778 367 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 C21orf58P58505 322 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 TAS2R50P59544 299 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 ERVK-8P63133 956 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 PHC1P78364 1004 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 ZNF763Q0D2J5 394 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 CEBPEQ15744 281 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 UGT8Q16880 541 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 IMPG1Q17R60 797 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 ZNF750Q32MQ0 723 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 ATP6AP1LQ52LC2 224 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 SPDYAQ5MJ70 313 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 IL23RQ5VWK5 629 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 SLC48A1Q6P1K1 146 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 KIRREL2Q6UWL6 708 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 QSOX2Q6ZRP7 698 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 PAGE2Q7Z2X7 111 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 ZNF595Q8IYB9 648 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 KIRREL3Q8IZU9 778 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 KRTCAP2Q8N6L1 136 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 CLHC1Q8NHS4 586 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 SNRNP27Q8WVK2 155 aaKnown RBP8.72□□□□□ -1.01
VPS35-211ENST00000569950 ZCCHC14Q8WYQ9 949 aaKnown RBP8.72□□□□□ -1.01
VPS35-211ENST00000569950 MIEF2Q96C03 454 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 ZNF764Q96H86 408 aaPredicted RBP8.72□□□□□ -1.01
VPS35-211ENST00000569950 DPH1Q9BZG8 443 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 TRIM4Q9C037 500 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 BRINP2Q9C0B6 783 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 SLC7A5P2Q9GIP4 190 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 COPS7BQ9H9Q2 264 aaPredicted RBP8.72□□□□□ -1.01
VPS35-211ENST00000569950 GPN2Q9H9Y4 310 aaPredicted RBP8.72□□□□□ -1.01
VPS35-211ENST00000569950 NPHS2Q9NP85 383 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 SLAMF7Q9NQ25 335 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 SLC52A3Q9NQ40 469 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 C14orf105Q9NVL8 296 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 AIG1Q9NVV5 245 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 NMRK1Q9NWW6 199 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 TAS2R7Q9NYW3 318 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 AHSPQ9NZD4 102 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 TMED5Q9Y3A6 229 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 PTRH2Q9Y3E5 179 aaKnown RBP8.72□□□□□ -1.01
VPS35-211ENST00000569950 TNRC6AQ8NDV7 1962 aaKnown RBP8.72□□□□□ -1.01
VPS35-211ENST00000569950 EXPH5Q8NEV8 1989 aa8.72□□□□□ -1.01
VPS35-211ENST00000569950 MYOCOSA0A1B0GUC4 107 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 TRPC5OSA6NMA1 111 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 C9J4A7 227 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 KLK10O43240 276 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 TBX19O60806 448 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 DIAPH2O60879 1101 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 CTNSO60931 367 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 SCN2BO60939 215 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 CYC1P08574 325 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 NR2F6P10588 404 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 PIM1P11309 404 aaPredicted RBP8.71□□□□□ -1.02
VPS35-211ENST00000569950 COX6A1P12074 109 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 LBPP18428 481 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 IL10P22301 178 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 CPN2P22792 545 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 MMP11P24347 488 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 GPR143P51810 404 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 HSD17B7P56937 341 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 ID2Q02363 134 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 Q0VFX4 171 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 MGAT2Q10469 447 aa8.71□□□□□ -1.02
VPS35-211ENST00000569950 PCOLCEQ15113 449 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms