RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ANKUB1A6NFN9 424 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 SMIM23A6NLE4 172 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 GLRA3O75311 464 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 PRKRAO75569 313 aaKnown RBP12.15□□□□□ -0.46
CNOT1-220ENST00000569916 SUPT7LO94864 414 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 OR4F21O95013 312 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 IFNA16P05015 189 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 CD96P40200 585 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 PRKAA2P54646 552 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 CLCQ05315 142 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 IFT88Q13099 833 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 SERTAD2Q14140 314 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 ESPL1Q14674 2120 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 OR1C1Q15619 314 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 EIF2S3LQ2VIR3 472 aaKnown RBP12.15□□□□□ -0.46
CNOT1-220ENST00000569916 ZNF766Q5HY98 468 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 ZNF468Q5VIY5 522 aaPredicted RBP12.15□□□□□ -0.46
CNOT1-220ENST00000569916 C18orf63Q68DL7 685 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 TMEM132CQ8N3T6 1108 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 BCORP1Q8N888 145 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 ST6GALNAC3Q8NDV1 305 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 MYRIPQ8NFW9 859 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 TRPC4APQ8TEL6 797 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 PTPMT1Q8WUK0 201 aaPredicted RBP12.15□□□□□ -0.46
CNOT1-220ENST00000569916 L3HYPDHQ96EM0 354 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 HES7Q9BYE0 225 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 DEFB126Q9BYW3 111 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 ELOVL6Q9H5J4 265 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 RPF2Q9H7B2 306 aaKnown RBP12.15□□□□□ -0.46
CNOT1-220ENST00000569916 FARSBQ9NSD9 589 aaKnown RBP12.15□□□□□ -0.46
CNOT1-220ENST00000569916 OLAHQ9NV23 265 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 LYARQ9NX58 379 aaKnown RBP12.15□□□□□ -0.46
CNOT1-220ENST00000569916 DCDC2Q9UHG0 476 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 ASB4Q9Y574 426 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 PCDHGB6Q9Y5F9 930 aa12.15□□□□□ -0.46
CNOT1-220ENST00000569916 A0A1W2PR48 441 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 CDK2AP1O14519 115 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 PROM1O43490 865 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 PRKNO60260 465 aaPredicted RBP12.14□□□□□ -0.47
CNOT1-220ENST00000569916 CDH16O75309 829 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 NEURL1O76050 574 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 RASAL1O95294 804 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 SLU7O95391 586 aaKnown RBP12.14□□□□□ -0.47
CNOT1-220ENST00000569916 DDAH2O95865 285 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 PDYNP01213 254 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 GBAP04062 536 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 FAM58BPP0C7Q3 252 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 EDN3P14138 238 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 KRT15P19012 456 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 IMPDH1P20839 514 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 BUD31P41223 144 aaPredicted RBP12.14□□□□□ -0.47
CNOT1-220ENST00000569916 TDGF1P3P51864 188 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 PMP22Q01453 160 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 OC90Q02509 493 aaPredicted RBP12.14□□□□□ -0.47
CNOT1-220ENST00000569916 SGO1Q5FBB7 561 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 TCHHL1Q5QJ38 904 aaPredicted RBP12.14□□□□□ -0.47
CNOT1-220ENST00000569916 FHL5Q5TD97 284 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 SPINK14Q6IE38 97 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 ZNF227Q86WZ6 799 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 SLC22A9Q8IVM8 553 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 OR4N5Q8IXE1 308 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 MORN4Q8NDC4 146 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 OR2W6PQ8NHA6 318 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 OR14A16Q8NHC5 309 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 PRR7Q8TB68 274 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 AENQ8WTP8 325 aaKnown RBP12.14□□□□□ -0.47
CNOT1-220ENST00000569916 THAP3Q8WTV1 239 aaPredicted RBP12.14□□□□□ -0.47
CNOT1-220ENST00000569916 NR4A3Q92570 626 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 DAZLQ92904 295 aaKnown RBP12.14□□□□□ -0.47
CNOT1-220ENST00000569916 SCMH1Q96GD3 660 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 ZNF382Q96SR6 550 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 MRPL1Q9BYD6 325 aaKnown RBP12.14□□□□□ -0.47
CNOT1-220ENST00000569916 TRIM45Q9H8W5 580 aaPredicted RBP12.14□□□□□ -0.47
CNOT1-220ENST00000569916 CLCA3PQ9Y6N3 262 aa12.14□□□□□ -0.47
CNOT1-220ENST00000569916 USP9XQ93008 2570 aaPredicted RBP12.13□□□□□ -0.47
CNOT1-220ENST00000569916 TMEM200CA6NKL6 621 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 C17orf105B2RV13 164 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 G3V2L1 256 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 FCHO1O14526 889 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 PLIN3O60664 434 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 SEMA7AO75326 666 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 AIFM1O95831 613 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 PROCP04070 461 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 NUDT17P0C025 328 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 NR2F6P10588 404 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 TLX1P31314 330 aaPredicted RBP12.13□□□□□ -0.47
CNOT1-220ENST00000569916 TRHRP34981 398 aaPredicted RBP12.13□□□□□ -0.47
CNOT1-220ENST00000569916 STT3AP46977 705 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 FOLH1Q04609 750 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 WDR93Q6P2C0 686 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 CYP20A1Q6UW02 462 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 ZYG11AQ6WRX3 759 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 METTL4Q8N3J2 472 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 ZNF321PQ8N8H1 164 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 CDYL2Q8N8U2 506 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 C7orf57Q8NEG2 295 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 SLC2A12Q8TD20 617 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 SELENOMQ8WWX9 145 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 TANKQ92844 425 aa12.13□□□□□ -0.47
CNOT1-220ENST00000569916 HBEGFQ99075 208 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms