RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 LPLP06858 475 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 OR56A5P0C7T3 313 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 DRD2P14416 443 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 RAB4AP20338 218 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 PCMT1P22061 227 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 FDFT1P37268 417 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 RPS16P62249 146 aaKnown RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 HPCAP84074 193 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 RHOT1Q8IXI2 618 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 OR2AP1Q8NGE2 309 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 SLC4A5Q9BY07 1137 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 C6orf62Q9GZU0 229 aaPredicted RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 SLC22A4Q9H015 551 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 P2RY12Q9H244 342 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 ACTL8Q9H568 366 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 ACTR8Q9H981 624 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 RHBDD3Q9Y3P4 386 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 CXorf51AA0A1B0GTR3 108 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 A0A1W2PPC4 97 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 PI15O43692 258 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 B4GALT2O60909 372 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 SORBS2O94875 1100 aaKnown RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 YES1P07947 543 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 COILP38432 576 aaPredicted RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 P2RY2P41231 377 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 GSSP48637 474 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 SUCLG1P53597 346 aaKnown RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 SLC25A11Q02978 314 aaKnown RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 C9orf152Q5JTZ5 239 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 SLC23A3Q6PIS1 610 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 MCATQ8IVS2 390 aaKnown RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 IFT20Q8IY31 132 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 FAM185AQ8N0U4 392 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 STK40Q8N2I9 435 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 FEZF2Q8TBJ5 459 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 MAGOHBQ96A72 148 aaKnown RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 LINC00615Q96LM1 132 aaPredicted RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 TECTBQ96PL2 329 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 CYP2S1Q96SQ9 504 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 SLC39A8Q9C0K1 460 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 HDHD2Q9H0R4 259 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 SERINC1Q9NRX5 453 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 CMTM6Q9NX76 183 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 ZNHIT2Q9UHR6 403 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 KCNK6Q9Y257 313 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 STARD10Q9Y365 291 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 WASF2Q9Y6W5 498 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 TSC2P49815 1807 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 MYO7AQ13402 2215 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 TEX51A0A1B0GUA7 166 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 PRAMEF27A3QJZ7 478 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 CFAP73A6NFT4 308 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 PRAMEF25A6NGN4 478 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 PRAMEF4O60810 478 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 PRAMEF11O60813 436 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 CTAG2O75638 210 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 ADRB1P08588 477 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 RBL1P28749 1068 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 ACTR1BP42025 376 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 PGDP52209 483 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 FADDQ13158 208 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 MRPL49Q13405 166 aaKnown RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 ZNF234Q14588 700 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 TGFBIQ15582 683 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 HIST2H2ACQ16777 129 aaPredicted RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 MEP1BQ16820 701 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 SLC25A52Q3SY17 297 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 PRAMEF5Q5TYX0 476 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 PRAMEF9Q5VWM5 478 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 PRAMEF6Q5VXH4 476 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 HIST2H2AA3Q6FI13 130 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 ETV3LQ6ZN32 361 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 CFAP206Q8IYR0 622 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 C1orf52Q8N6N3 182 aaKnown RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 CAMKVQ8NCB2 501 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 MDGA1Q8NFP4 955 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 DTD2Q96FN9 168 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 SLC35A4Q96G79 324 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 FCRL2Q96LA5 508 aaPredicted RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 MGME1Q9BQP7 344 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 SLC17A9Q9BYT1 436 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 GAL3ST2Q9H3Q3 398 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 PRMT8Q9NR22 394 aaPredicted RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 PCYOX1Q9UHG3 505 aa6.36□□□□□ -1.39
SMG1-217ENST00000569764 AGO1Q9UL18 857 aaKnown RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 OAS3Q9Y6K5 1087 aaKnown RBP6.36□□□□□ -1.39
SMG1-217ENST00000569764 WNT9AO14904 365 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 KLK10O43240 276 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 VIPR1P32241 457 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 MMP13P45452 471 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 CCT3P49368 545 aaKnown RBP6.35□□□□□ -1.39
SMG1-217ENST00000569764 MFAP4P55083 255 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 SPCS3P61009 180 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 ZNF844Q08AG5 666 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 INCA1Q0VD86 236 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 MMRN1Q13201 1228 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 STX3Q13277 289 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 FAM214AQ32MH5 1076 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 MS4A13Q5J8X5 152 aa6.35□□□□□ -1.39
SMG1-217ENST00000569764 LRRC70Q7Z2Q7 622 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms