RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 RNF130Q86XS8 419 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 GORASP2Q9H8Y8 452 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 ARMC1Q9NVT9 282 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 TAS2R7Q9NYW3 318 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 EHD3Q9NZN3 535 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 ANAPC2Q9UJX6 822 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 A0A1B0GTQ1 180 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 CSF2RBP32927 897 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 CHI3L1P36222 383 aaPredicted RBP10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 CRATP43155 626 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 MTX3Q5HYI7 312 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 CPZQ66K79 652 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 SLC48A1Q6P1K1 146 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 IZUMO2Q6UXV1 221 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 ABHD13Q7L211 337 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 MCATQ8IVS2 390 aaKnown RBP10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 DNAJC22Q8N4W6 341 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 OR5P2Q8WZ92 322 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 AMDHD1Q96NU7 426 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 EPS8L2Q9H6S3 715 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 LYARQ9NX58 379 aaKnown RBP10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 SUSD2Q9UGT4 822 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 GMEB1Q9Y692 573 aa10.34□□□□□ -0.75
PDXDC1-216ENST00000569715 RNF103-CHMP3A0A140T963 221 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 B4GAT1O43505 415 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 NUDT21O43809 227 aaKnown RBP10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 GPIP06744 558 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 NR2F6P10588 404 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 FEN1P39748 380 aaKnown RBP10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 LIM2P55344 173 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 KCNAB1Q14722 419 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 VMACQ2NL98 169 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 SFT2D3Q587I9 215 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 OGFRL1Q5TC84 451 aaPredicted RBP10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 C11orf74Q86VG3 221 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 ARHGEF39Q8N4T4 335 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 TNIP2Q8NFZ5 429 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 SUN3Q8TAQ9 357 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 SERINC2Q96SA4 455 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 NAALAD2Q9Y3Q0 740 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 TLCD2A6NGC4 264 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 ZSCAN9O15535 394 aaPredicted RBP10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 SERPINA1P01009 418 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 GABRA4P48169 554 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 NCBP2P52298 156 aaKnown RBP eCLIP10.33□□□□□ -0.768e-13■□□□□ 8.4
PDXDC1-216ENST00000569715 EPHA4P54764 986 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 GRAMD1BQ3KR37 738 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 USP53Q70EK8 1073 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 TRIML2Q8N7C3 387 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 SAP25Q8TEE9 199 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 PPWD1Q96BP3 646 aaKnown RBP10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 ZBED6CLQ96FA7 236 aaPredicted RBP10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 C10orf90Q96M02 699 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 SOHLH2Q9NX45 425 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 B3GALT2O43825 422 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 GMNNO75496 209 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 GLB1P16278 677 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 SIM1P81133 766 aaPredicted RBP10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 TNFRSF17Q02223 184 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 LRRC23Q53EV4 343 aaPredicted RBP10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 PEAR1Q5VY43 1037 aaPredicted RBP10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 ERMP1Q7Z2K6 904 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 GOLM1Q8NBJ4 401 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 OR52N2Q8NGI0 321 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 AHCYL2Q96HN2 611 aaKnown RBP10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 ZC3H10Q96K80 434 aaKnown RBP10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 RNF145Q96MT1 663 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 SMOC1Q9H4F8 434 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 FBXO4Q9UKT5 387 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 DAPP1Q9UN19 280 aa10.33□□□□□ -0.76
PDXDC1-216ENST00000569715 LY6G6EA0A0G2JKS1 128 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 URADA6NGE7 173 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 SGK494L7N484 410 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 GUCY1B2O75343 617 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 TNFRSF21O75509 655 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 UQCRC2P22695 453 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 CPN2P22792 545 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 PPIBP23284 216 aaKnown RBP10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 AQP1P29972 269 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 MLLT3P42568 568 aaPredicted RBP10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 CRYBA2P53672 197 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 CCDC116Q8IYX3 515 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 TMEM52Q8NDY8 209 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 DNAJC9Q8WXX5 260 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 CCDC74AQ96AQ1 378 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 TCTN2Q96GX1 697 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 BBS4Q96RK4 519 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 GAREM1Q9H706 876 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 ACSS1Q9NUB1 689 aaPredicted RBP10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 DCAF13Q9NV06 445 aaKnown RBP10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 U3KQA8 63 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 ADAMTS20P59510 1910 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 GALR3O60755 368 aaPredicted RBP10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 RDH16O75452 317 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 PRKD3O94806 890 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 AQP4P55087 323 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 SNAP47Q5SQN1 464 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 OR4N5Q8IXE1 308 aa10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 ZNF655Q8N720 491 aaPredicted RBP10.32□□□□□ -0.76
PDXDC1-216ENST00000569715 OR9A4Q8NGU2 314 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms