RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 HOXC4P09017 264 aaPredicted RBP2.26□□□□□ -2.05
UBR1-209ENST00000569243 FOSL2P15408 326 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 BDNFP23560 247 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 NPBWR1P48145 328 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 CCR4P51679 360 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 PEX3P56589 373 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 TFCP2Q12800 502 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 ABRQ12979 859 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 LTB4RQ15722 352 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 CGB2Q6NT52 195 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 CLEC4GQ6UXB4 293 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 CYP4V2Q6ZWL3 525 aaPredicted RBP2.26□□□□□ -2.05
UBR1-209ENST00000569243 ADGRD2Q7Z7M1 963 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 CACUL1Q86Y37 369 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 OR8H2Q8N162 312 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 ZNF525Q8N782 197 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 SETD6Q8TBK2 473 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 SEPT8Q92599 483 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 NUS1Q96E22 293 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 CDHR1Q96JP9 859 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 SIGLEC12Q96PQ1 595 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 PAXXQ9BUH6 204 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 EDEM3Q9BZQ6 932 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 LIME1Q9H400 295 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 MRPL17Q9NRX2 175 aaKnown RBP2.26□□□□□ -2.05
UBR1-209ENST00000569243 CHCHD3Q9NX63 227 aaKnown RBP2.26□□□□□ -2.05
UBR1-209ENST00000569243 IL17CQ9P0M4 197 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 DHRS4-AS1Q9P1J3 65 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 ZNF319Q9P2F9 582 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 NFKBIL1Q9UBC1 381 aaPredicted RBP2.26□□□□□ -2.05
UBR1-209ENST00000569243 ITGA11Q9UKX5 1188 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 ZNF346Q9UL40 294 aaKnown RBP2.26□□□□□ -2.05
UBR1-209ENST00000569243 PLEKHA6Q9Y2H5 1048 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 TRAV9-2A0A087WT02 112 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 ZSCAN5CA6NGD5 496 aaPredicted RBP2.25□□□□□ -2.05
UBR1-209ENST00000569243 YDJCA8MPS7 323 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 TMCO5BA8MYB1 307 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 HMGB1P1B2RPK0 211 aaPredicted RBP2.25□□□□□ -2.05
UBR1-209ENST00000569243 KBTBD13C9JR72 458 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 SELENOFO60613 162 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 FASP25445 335 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 CHRNA3P32297 505 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 RIPK4P57078 832 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 SLC3A1Q07837 685 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 IQCCQ4KMZ1 466 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 NHLRC1Q6VVB1 395 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 GVQW1Q8N7I0 195 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 FAM162AQ96A26 154 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 SGF29Q96ES7 293 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 ZBED6CLQ96FA7 236 aaPredicted RBP2.25□□□□□ -2.05
UBR1-209ENST00000569243 SIPA1Q96FS4 1042 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 PPP1R16AQ96I34 528 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 ZNF285Q96NJ3 590 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 RASL10BQ96S79 203 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 C17orf62Q9BQA9 187 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 MTIF3Q9H2K0 278 aaKnown RBP2.25□□□□□ -2.05
UBR1-209ENST00000569243 MYOZ2Q9NPC6 264 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 GPR132Q9UNW8 380 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 FBXO7Q9Y3I1 522 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 ARID1AO14497 2285 aa2.25□□□□□ -2.05
UBR1-209ENST00000569243 KAT6BQ8WYB5 2073 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 KLF18A0A0U1RQI7 1052 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 RNF212BA8MTL3 300 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 H7C0S8 307 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 M0R296 226 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 LETM1O95202 739 aaPredicted RBP2.24□□□□□ -2.05
UBR1-209ENST00000569243 CCDC159P0C7I6 412 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 CASTP20810 708 aaKnown RBP2.24□□□□□ -2.05
UBR1-209ENST00000569243 SOAT1P35610 550 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 GP5P40197 560 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 ADARP55265 1226 aaKnown RBP2.24□□□□□ -2.05
UBR1-209ENST00000569243 FOLH1Q04609 750 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 MEF2DQ14814 521 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 C1orf189Q5VU69 101 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 PM20D1Q6GTS8 502 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 ALKBH5Q6P6C2 394 aaKnown RBP2.24□□□□□ -2.05
UBR1-209ENST00000569243 TRAT1Q6PIZ9 186 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 C17orf64Q86WR6 236 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 THNSL1Q8IYQ7 743 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 SAMD12Q8N8I0 201 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 Q8NFD4 153 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 U2AF1L4Q8WU68 220 aaKnown RBP2.24□□□□□ -2.05
UBR1-209ENST00000569243 RBM18Q96H35 190 aaKnown RBP2.24□□□□□ -2.05
UBR1-209ENST00000569243 INTS14Q96SY0 518 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 CENPOQ9BU64 300 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 DEFB126Q9BYW3 111 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 LSG1Q9H089 658 aaKnown RBP2.24□□□□□ -2.05
UBR1-209ENST00000569243 DPEP3Q9H4B8 488 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 NT5DC2Q9H857 520 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 MINDY3Q9H8M7 445 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 ZNF275Q9NSD4 429 aaPredicted RBP2.24□□□□□ -2.05
UBR1-209ENST00000569243 ARMCX1Q9P291 453 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 CIDEBQ9UHD4 219 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 TMED7Q9Y3B3 224 aa2.24□□□□□ -2.05
UBR1-209ENST00000569243 CCDC162PA2VCL2 907 aa2.23□□□□□ -2.05
UBR1-209ENST00000569243 MCF2LO15068 1137 aa2.23□□□□□ -2.05
UBR1-209ENST00000569243 WDR46O15213 610 aaKnown RBP2.23□□□□□ -2.05
UBR1-209ENST00000569243 TSC22D2O75157 780 aa2.23□□□□□ -2.05
UBR1-209ENST00000569243 RHBDL1O75783 438 aa2.23□□□□□ -2.05
UBR1-209ENST00000569243 RLN1P04808 185 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms