RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 PROM1O43490 865 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 SLC25A12O75746 678 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 ZFAND5O76080 213 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 ETHE1O95571 254 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 STSP08842 583 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 TLX1P31314 330 aaPredicted RBP18.9■□□□□ 0.62
CLK3-225ENST00000569063 BSGP35613 385 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 ARL1P40616 181 aaPredicted RBP18.9■□□□□ 0.62
CLK3-225ENST00000569063 IGLV3-21P80748 117 aaPredicted RBP18.9■□□□□ 0.62
CLK3-225ENST00000569063 PMP22Q01453 160 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 BIKQ13323 160 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 GGTA1PQ4G0N0 100 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 FRG2Q64ET8 278 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 MRM1Q6IN84 353 aaKnown RBP18.9■□□□□ 0.62
CLK3-225ENST00000569063 ACMSDQ8TDX5 336 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 ZNF483Q8TF39 744 aaPredicted RBP18.9■□□□□ 0.62
CLK3-225ENST00000569063 THAP3Q8WTV1 239 aaPredicted RBP18.9■□□□□ 0.62
CLK3-225ENST00000569063 TANKQ92844 425 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 FRG2BQ96QU4 278 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 SERPINI1Q99574 410 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 RPF2Q9H7B2 306 aaKnown RBP18.9■□□□□ 0.62
CLK3-225ENST00000569063 TMEM216Q9P0N5 145 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 PSMC3IPQ9P2W1 217 aaPredicted RBP18.9■□□□□ 0.62
CLK3-225ENST00000569063 ATG4BQ9Y4P1 393 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 ASB4Q9Y574 426 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 LRRK2Q5S007 2527 aa18.9■□□□□ 0.62
CLK3-225ENST00000569063 PTPN13Q12923 2485 aa18.89■□□□□ 0.61
CLK3-225ENST00000569063 MYOCOSA0A1B0GUC4 107 aa18.89■□□□□ 0.61
CLK3-225ENST00000569063 TMEM200CA6NKL6 621 aa18.89■□□□□ 0.61
CLK3-225ENST00000569063 C17orf105B2RV13 164 aa18.89■□□□□ 0.61
CLK3-225ENST00000569063 FGF17O60258 216 aa18.89■□□□□ 0.61
CLK3-225ENST00000569063 EEDO75530 441 aaKnown RBP18.89■□□□□ 0.61
CLK3-225ENST00000569063 ITGA10O75578 1167 aa18.89■□□□□ 0.61
CLK3-225ENST00000569063 SEMA3DO95025 777 aa18.89■□□□□ 0.61
CLK3-225ENST00000569063 HNRNPH2P55795 449 aaKnown RBP18.89■□□□□ 0.61
CLK3-225ENST00000569063 TNFRSF17Q02223 184 aa18.89■□□□□ 0.61
CLK3-225ENST00000569063 C18orf63Q68DL7 685 aa18.89■□□□□ 0.61
CLK3-225ENST00000569063 GALNTL5Q7Z4T8 443 aa18.89■□□□□ 0.61
CLK3-225ENST00000569063 MILR1Q7Z6M3 343 aa18.89■□□□□ 0.61
CLK3-225ENST00000569063 GSPT2Q8IYD1 628 aaKnown RBP18.89■□□□□ 0.61
CLK3-225ENST00000569063 OR4F6Q8NGB9 312 aa18.89■□□□□ 0.61
CLK3-225ENST00000569063 MTFMTQ96DP5 389 aaKnown RBP18.89■□□□□ 0.61
CLK3-225ENST00000569063 SEMA4BQ9NPR2 832 aaPredicted RBP18.89■□□□□ 0.61
CLK3-225ENST00000569063 LYARQ9NX58 379 aaKnown RBP18.89■□□□□ 0.61
CLK3-225ENST00000569063 SEC14L3Q9UDX4 400 aa18.89■□□□□ 0.61
CLK3-225ENST00000569063 YARS2Q9Y2Z4 477 aaKnown RBP18.89■□□□□ 0.61
CLK3-225ENST00000569063 TMPRSS11DO60235 418 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 PRKNO60260 465 aaPredicted RBP18.88■□□□□ 0.61
CLK3-225ENST00000569063 NME2P1O60361 137 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 OTCP00480 354 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 TNNI3P19429 210 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 NME2P22392 152 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 BUD31P41223 144 aaPredicted RBP18.88■□□□□ 0.61
CLK3-225ENST00000569063 STT3AP46977 705 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 KCNK10P57789 538 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 HERVK_113P63132 956 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 ID2Q02363 134 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 SRSF11Q05519 484 aaKnown RBP18.88■□□□□ 0.61
CLK3-225ENST00000569063 MAPKAPK3Q16644 382 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 TEX35Q5T0J7 233 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 TTC19Q6DKK2 380 aaPredicted RBP18.88■□□□□ 0.61
CLK3-225ENST00000569063 CYP20A1Q6UW02 462 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 GFRALQ6UXV0 394 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 HSDL2Q6YN16 418 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 RPS27LQ71UM5 84 aaKnown RBP18.88■□□□□ 0.61
CLK3-225ENST00000569063 FAM98AQ8NCA5 519 aaKnown RBP18.88■□□□□ 0.61
CLK3-225ENST00000569063 MYRIPQ8NFW9 859 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 OR8K3Q8NH51 312 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 MZB1Q8WU39 189 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 TMEM125Q96AQ2 219 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 FRMD6Q96NE9 622 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 ERVK-6Q9BXR3 956 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 MYOTQ9UBF9 498 aa18.88■□□□□ 0.61
CLK3-225ENST00000569063 A0A1B0GTL3 188 aa18.87■□□□□ 0.61
CLK3-225ENST00000569063 A0A1B0GUH1 482 aa18.87■□□□□ 0.61
CLK3-225ENST00000569063 CYSRT1A8MQ03 144 aa18.87■□□□□ 0.61
CLK3-225ENST00000569063 PPP6CO00743 305 aa18.87■□□□□ 0.61
CLK3-225ENST00000569063 LRRTM2O43300 516 aa18.87■□□□□ 0.61
CLK3-225ENST00000569063 UNC5CO95185 931 aa18.87■□□□□ 0.61
CLK3-225ENST00000569063 GSTA1P08263 222 aa18.87■□□□□ 0.61
CLK3-225ENST00000569063 FAM58BPP0C7Q3 252 aa18.87■□□□□ 0.61
CLK3-225ENST00000569063 TAC1P20366 129 aa18.87■□□□□ 0.61
CLK3-225ENST00000569063 CDH13P55290 713 aa18.87■□□□□ 0.61
CLK3-225ENST00000569063 FOLH1Q04609 750 aa18.87■□□□□ 0.61
CLK3-225ENST00000569063 IFT88Q13099 833 aa18.87■□□□□ 0.61
CLK3-225ENST00000569063 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.87■□□□□ 0.61
CLK3-225ENST00000569063 NUDT13Q86X67 352 aa18.87■□□□□ 0.61
CLK3-225ENST00000569063 OR4N5Q8IXE1 308 aa18.87■□□□□ 0.61
CLK3-225ENST00000569063 TMEM156Q8N614 296 aa18.87■□□□□ 0.61
CLK3-225ENST00000569063 SLC2A12Q8TD20 617 aa18.87■□□□□ 0.61
CLK3-225ENST00000569063 OR8D2Q9GZM6 311 aa18.87■□□□□ 0.61
CLK3-225ENST00000569063 PLEKHB1Q9UF11 243 aaPredicted RBP18.87■□□□□ 0.61
CLK3-225ENST00000569063 HIVEP3Q5T1R4 2406 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 A0A1W2PR48 441 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 DLX3O60479 287 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 OR2J2O76002 312 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 WISP2O76076 250 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 MLYCDO95822 493 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 COX7A2P14406 83 aa18.86■□□□□ 0.61
CLK3-225ENST00000569063 TNFRSF8P28908 595 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms